Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JVX94_RS07615 Genome accession   NZ_CP070345
Coordinates   1463542..1464114 (-) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus sp. PDNC022     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1458542..1469114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVX94_RS07585 (JVX94_07585) - 1458583..1459074 (-) 492 WP_205185104.1 molybdenum cofactor biosynthesis protein MoaE -
  JVX94_RS07590 (JVX94_07590) mobB 1459071..1459595 (-) 525 WP_095408683.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  JVX94_RS07595 (JVX94_07595) glp 1459577..1460854 (-) 1278 WP_205185107.1 gephyrin-like molybdotransferase Glp -
  JVX94_RS07600 (JVX94_07600) - 1460864..1461880 (-) 1017 WP_205185109.1 thiazole biosynthesis adenylyltransferase ThiF -
  JVX94_RS07605 (JVX94_07605) - 1461911..1462492 (-) 582 WP_144470358.1 molybdenum cofactor guanylyltransferase -
  JVX94_RS07610 (JVX94_07610) - 1462578..1463495 (+) 918 WP_095408369.1 sigmaE regulated sporulation protein -
  JVX94_RS07615 (JVX94_07615) rok 1463542..1464114 (-) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  JVX94_RS07620 (JVX94_07620) - 1464598..1465056 (-) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  JVX94_RS07625 (JVX94_07625) ahpA 1465139..1465681 (-) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  JVX94_RS07630 (JVX94_07630) - 1465954..1466763 (+) 810 WP_095408368.1 mechanosensitive ion channel family protein -
  JVX94_RS07635 (JVX94_07635) - 1466786..1467028 (-) 243 WP_024424725.1 YkuS family protein -
  JVX94_RS07640 (JVX94_07640) - 1467079..1468257 (-) 1179 WP_205185112.1 N-acetyldiaminopimelate deacetylase -
  JVX94_RS07645 (JVX94_07645) dapD 1468292..1469002 (-) 711 WP_095408367.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=539284 JVX94_RS07615 WP_024426871.1 1463542..1464114(-) (rok) [Bacillus sp. PDNC022]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=539284 JVX94_RS07615 WP_024426871.1 1463542..1464114(-) (rok) [Bacillus sp. PDNC022]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAGACGGATTCACTCCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCTTCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCCCGCCCTGGTTCAAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGTTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8