Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   LK450_RS06895 Genome accession   NZ_CP085939
Coordinates   1404153..1404299 (+) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399153..1409299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS06870 (LK450_06870) dnaA 1399614..1400957 (-) 1344 WP_003032031.1 chromosomal replication initiator protein DnaA -
  LK450_RS06875 (LK450_06875) spo0J 1401186..1401953 (-) 768 WP_003032028.1 ParB/RepB/Spo0J family partition protein Regulator
  LK450_RS06880 (LK450_06880) htrA 1402008..1403198 (-) 1191 WP_003032033.1 S1C family serine protease Regulator
  LK450_RS06885 (LK450_06885) rlmH 1403392..1403871 (+) 480 WP_003032032.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LK450_RS06895 (LK450_06895) comC 1404153..1404299 (+) 147 WP_003029519.1 bacteriocin Regulator
  LK450_RS06900 (LK450_06900) comD/comD2 1404320..1405642 (+) 1323 WP_221739197.1 GHKL domain-containing protein Regulator
  LK450_RS06905 (LK450_06905) comE 1405642..1406391 (+) 750 WP_018543656.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=539232 LK450_RS06895 WP_003029519.1 1404153..1404299(+) (comC) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=539232 LK450_RS06895 WP_003029519.1 1404153..1404299(+) (comC) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396