Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   LK450_RS05905 Genome accession   NZ_CP085939
Coordinates   1220067..1222397 (-) Length   776 a.a.
NCBI ID   WP_003032994.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1215067..1227397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS05890 (LK450_05890) sstT 1215983..1217197 (+) 1215 WP_026248199.1 serine/threonine transporter SstT -
  LK450_RS05895 (LK450_05895) trxA 1218058..1218372 (-) 315 WP_003032965.1 thioredoxin -
  LK450_RS05900 (LK450_05900) - 1218581..1219999 (-) 1419 WP_003032960.1 C69 family dipeptidase -
  LK450_RS05905 (LK450_05905) mutS/mutS2 1220067..1222397 (-) 2331 WP_003032994.1 endonuclease MutS2 Machinery gene
  LK450_RS05910 (LK450_05910) - 1222458..1223006 (-) 549 WP_003033009.1 CvpA family protein -
  LK450_RS05915 (LK450_05915) - 1223003..1223308 (-) 306 WP_003026418.1 hypothetical protein -
  LK450_RS05920 (LK450_05920) rnhC 1223394..1224284 (+) 891 WP_003032992.1 ribonuclease HIII -
  LK450_RS05925 (LK450_05925) lepB 1224288..1224902 (+) 615 WP_003033014.1 signal peptidase I -

Sequence

Protein


Download         Length: 776 a.a.        Molecular weight: 87474.97 Da        Isoelectric Point: 5.9806

>NTDB_id=539221 LK450_RS05905 WP_003032994.1 1220067..1222397(-) (mutS/mutS2) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MNRKILETLEFGKIKALFEPYLLTEQGCLELQQLFPSNKQERLETAFLEMTDMQQIFVQHPHFSLAATQDIMGLTKRLGL
EGDLNIEEFLALKRVLAVTQELTDFYEDLENVELQRLNRLFENLVSFPSLQGALQAINEGGFVESFASDNLARIRRKIQE
NEVQVRDILQDILKTKGDMLADQVVASRNGRNVLPVKNTFRHRISGVVHDISSSGNTVYIEPRAVVNLNEEITNARADER
YEILRILQELSERIRPHAAEIANNAWIIGHLDFVRAKVRFMQERGAVVPKLSDRQDIRLLHVAHPLIENAVANDLYFAAD
LTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADEGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQSD
ENSLVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKVYGIETEGVQNASMEFDTDSLRPTYRFMQGVPG
RSNAFEIARRLGLSVRVVKDAQELTDTDSDVNRVIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIIDVALTESDTILKNLHAKSSLKPHEIIEAKGQLKKLAPETVDLSKNKVLKQAKKARKPKVGDDILVISY
GQRGTLVNQLKDGRWEAQVGLIKMTLEEAEFNLLKAEKEQPKKKQVNVVKRTTTSGPRARLDLRGKRYEEAMQELDAFID
QALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVVFK

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=539221 LK450_RS05905 WP_003032994.1 1220067..1222397(-) (mutS/mutS2) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGAATAGAAAAATTTTAGAAACGTTAGAATTTGGGAAAATCAAGGCGCTCTTTGAACCCTATCTTCTGACAGAACAAGG
GTGCTTGGAATTGCAACAGTTGTTCCCGTCCAATAAACAAGAAAGGCTGGAGACAGCATTCTTAGAAATGACGGACATGC
AGCAGATTTTTGTACAGCATCCACATTTCAGTCTGGCTGCGACCCAAGACATTATGGGCTTGACCAAGCGCTTGGGGCTG
GAAGGCGACTTAAACATTGAAGAATTTCTCGCTCTGAAGCGGGTTCTGGCTGTCACGCAAGAATTGACTGATTTTTATGA
GGATTTGGAAAATGTTGAGTTGCAAAGATTGAATCGGCTTTTTGAAAATTTGGTTTCTTTTCCGAGCTTGCAAGGAGCGT
TGCAGGCTATCAATGAGGGCGGATTTGTTGAAAGTTTTGCTAGTGATAATTTGGCTCGCATTCGCCGAAAAATTCAAGAA
AATGAAGTTCAAGTGAGAGATATTTTGCAAGATATTCTCAAAACCAAGGGCGATATGTTAGCAGATCAAGTAGTAGCCAG
TCGAAACGGTCGCAATGTTTTGCCGGTCAAAAATACATTCCGCCATCGTATCTCAGGCGTGGTGCATGATATTTCTTCTA
GTGGAAACACGGTGTATATCGAGCCGCGGGCGGTGGTCAATCTCAATGAAGAAATCACCAATGCACGGGCAGACGAGCGC
TATGAAATTTTACGGATTTTGCAAGAATTATCAGAACGCATTCGCCCGCATGCTGCTGAAATTGCCAATAATGCTTGGAT
TATCGGACATCTGGACTTTGTTCGAGCTAAGGTGCGCTTTATGCAGGAGAGAGGAGCGGTAGTACCGAAGCTGTCTGACC
GTCAGGATATTCGACTGCTCCATGTTGCTCATCCTCTGATAGAAAATGCAGTAGCTAATGACCTGTACTTTGCGGCAGAT
TTGACTGAGATTGTCATTACGGGTCCGAATACAGGCGGAAAGACCATTATGCTCAAAACCCTAGGCTTGGCTCAGCTTAT
GGCACAGTCTGGCCTGCCTATTTTGGCAGATGAAGGGAGCCGAGTGGGAATTTTTGACCAAATCTTTGCGGACATTGGAG
ACGAGCAGTCTATTGAGCAGAGCTTATCGACTTTCTCTAGCCACATGACCAATATTGTTGCCATTTTAGAGCAGTCAGAC
GAAAATTCTTTGGTGCTTTTGGACGAGCTTGGAGCTGGAACCGACCCGCAGGAGGGTGCAGCTCTTGCTATGGCAATTCT
TGAAGACTTGCGACTGCGACAGGTCAAGACAATGGCAACGACCCACTATCCAGAGCTTAAGGTCTATGGGATTGAGACTG
AGGGAGTGCAAAATGCCAGCATGGAGTTTGATACAGATAGCCTAAGACCGACTTATCGTTTTATGCAGGGAGTGCCGGGT
CGCTCCAATGCTTTTGAGATCGCAAGGCGTTTAGGCCTGTCTGTTAGAGTGGTCAAGGATGCTCAAGAATTGACTGATAC
GGACAGCGATGTTAATCGCGTTATTGAACGCTTGGAAGAGCAGACCTTGGAAAGCCGCAAGCGGTTGGATAATATCCGAG
AGGTGGAGCAAGAAAATCTCAAATTTAACCGCGCTCTTAAAAAGCTCTACAACGAGTTCAATCGGGAAAAAGAAACTGAG
CTAAATAAGGCAAGGCTGGAAGCGCAGGAAATCATTGATGTGGCGCTGACCGAGAGTGATACGATTCTCAAAAATCTACA
TGCTAAGTCCAGTCTCAAACCGCACGAAATTATTGAAGCTAAAGGTCAGCTGAAAAAATTGGCTCCTGAAACGGTGGATT
TGTCGAAAAACAAGGTGCTGAAGCAAGCCAAAAAAGCACGGAAACCAAAAGTGGGAGACGATATTCTGGTGATTAGCTAC
GGTCAGAGAGGCACGCTTGTCAATCAGCTCAAAGACGGTCGCTGGGAAGCACAAGTTGGGCTCATCAAAATGACCTTGGA
GGAAGCAGAGTTTAACCTGCTCAAAGCTGAAAAAGAACAGCCTAAGAAAAAGCAGGTCAATGTGGTGAAACGGACGACAA
CAAGCGGACCAAGAGCCAGATTGGACTTGCGAGGCAAGCGCTACGAAGAAGCCATGCAAGAGCTGGATGCCTTTATTGAC
CAAGCCTTGCTCAACAATATGGCGCAGGTAGACATTATCCACGGGATCGGGACGGGCGTCATTCGCGAAGGCGTCACCAA
ATATCTCCGTCGCAATAAGCATGTCAAGAGTTTTGGCTATGCACCGCAAAATGCTGGGGGTAGCGGAGCAACTATTGTGG
TGTTTAAGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-669)

Smr domain (Smr)

(701-776)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.848

100

0.405