Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   JQN76_RS04195 Genome accession   NZ_CP070305
Coordinates   863272..864159 (+) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus sp. SM3655     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 858272..869159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQN76_RS04165 (JQN76_04165) - 859004..859765 (+) 762 WP_000323442.1 alpha/beta hydrolase family protein -
  JQN76_RS04170 (JQN76_04170) - 860010..860465 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  JQN76_RS14255 - 860587..860688 (+) 102 WP_000731972.1 SE2200 family small protein -
  JQN76_RS04180 (JQN76_04180) - 860748..862172 (-) 1425 WP_000953758.1 alkaline phosphatase -
  JQN76_RS04185 (JQN76_04185) - 862370..862570 (+) 201 WP_000604727.1 hypothetical protein -
  JQN76_RS04190 (JQN76_04190) braR 862596..863261 (+) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  JQN76_RS04195 (JQN76_04195) braS 863272..864159 (+) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  JQN76_RS04200 (JQN76_04200) - 864267..865022 (+) 756 WP_001836721.1 ABC transporter ATP-binding protein -
  JQN76_RS04205 (JQN76_04205) - 865019..867019 (+) 2001 WP_000776734.1 ABC transporter permease -
  JQN76_RS04210 (JQN76_04210) - 867678..867791 (+) 114 WP_011447078.1 hypothetical protein -
  JQN76_RS04215 (JQN76_04215) - 868173..868433 (+) 261 WP_001791974.1 hypothetical protein -
  JQN76_RS04220 (JQN76_04220) - 868443..868940 (+) 498 WP_001065268.1 glutathione peroxidase -
  JQN76_RS04225 (JQN76_04225) - 869048..869131 (-) 84 WP_031797553.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=539092 JQN76_RS04195 WP_000143426.1 863272..864159(+) (braS) [Staphylococcus sp. SM3655]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=539092 JQN76_RS04195 WP_000143426.1 863272..864159(+) (braS) [Staphylococcus sp. SM3655]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997