Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C380_RS19625 Genome accession   NC_018708
Coordinates   4278618..4279016 (-) Length   132 a.a.
NCBI ID   WP_015015589.1    Uniprot ID   -
Organism   Acidovorax sp. KKS102     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4273618..4284016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C380_RS19610 (C380_19655) - 4275400..4277688 (-) 2289 WP_015015587.1 methyl-accepting chemotaxis protein -
  C380_RS19615 (C380_19660) - 4277710..4278237 (-) 528 WP_015015588.1 chemotaxis protein CheW -
  C380_RS19620 (C380_19665) - 4278253..4278618 (-) 366 WP_005796104.1 PleD family two-component system response regulator -
  C380_RS19625 (C380_19670) pilG 4278618..4279016 (-) 399 WP_015015589.1 PleD family two-component system response regulator Regulator
  C380_RS24700 (C380_19675) - 4279076..4279249 (-) 174 WP_015015590.1 rubredoxin -
  C380_RS19630 (C380_19680) - 4279344..4280303 (+) 960 WP_015015591.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  C380_RS19635 (C380_19685) hemL 4280287..4281600 (+) 1314 WP_015015592.1 glutamate-1-semialdehyde 2,1-aminomutase -
  C380_RS19640 (C380_19690) - 4281701..4282480 (-) 780 WP_015015593.1 IclR family transcriptional regulator C-terminal domain-containing protein -
  C380_RS19645 (C380_19695) pobA 4282738..4283922 (+) 1185 WP_015015594.1 4-hydroxybenzoate 3-monooxygenase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14594.76 Da        Isoelectric Point: 6.9234

>NTDB_id=53900 C380_RS19625 WP_015015589.1 4278618..4279016(-) (pilG) [Acidovorax sp. KKS102]
MTTTGASFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNSQQGAI

Nucleotide


Download         Length: 399 bp        

>NTDB_id=53900 C380_RS19625 WP_015015589.1 4278618..4279016(-) (pilG) [Acidovorax sp. KKS102]
TTGACTACAACAGGCGCATCTTTCAAAGTGCTCGTGGTGGATGACAGCAACACCATCCGTCGAAGCGCCGAGATTTTTCT
CAAGCAGGGGGGGCACGAAGTCTTGTTGGCCGACGACGGCTTTGATGCTTTGGCCAAAGTCAATGATTACCAGCCTCAGC
TGATTTTTTGCGACATCCTCATGCCCAAGCTCGACGGGTACCAGACCTGCGCCATCATCAAGCGCAATGCCCGTTTTGCA
GATACTCCGGTAGTGATGCTGTCCTCCAAGGACGGTGTGTTCGACAAAGCGCGTGGGCGCATGGTTGGCTGCCAAGAATA
TCTCACCAAGCCGTTTACCAAAGACCAGCTGTTGCAGGCCGTGCAGCAGTTTGGCAATTCCCAACAAGGAGCTATCTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.198

91.667

0.515

Multiple sequence alignment