Detailed information NTG0538940

Bioinformatically predicted

Overview

• Name: pilW
• Type: Machinery gene
• Locus tag: NLHDIDDJ_RS17690
• Genome accession: NZ_CP085788
• Coordinates: 3690977..3692014 (-)
• Length: 345 a.a.
• NCBI ID: WP_114159401.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain RCH52
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3685977..3697014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLHDIDDJ_RS17675 (NLHDIDDJ_03512)	pilY2	3686006..3686482 (-)	477	WP_031380019.1	type IV pilin protein	Machinery gene
NLHDIDDJ_RS17680 (NLHDIDDJ_03513)	-	3686496..3690182 (-)	3687	WP_228413435.1	PilC/PilY family type IV pilus protein	-
NLHDIDDJ_RS17685 (NLHDIDDJ_03514)	-	3690198..3690980 (-)	783	WP_114159403.1	pilus assembly PilX N-terminal domain-containing protein	-
NLHDIDDJ_RS17690 (NLHDIDDJ_03515)	pilW	3690977..3692014 (-)	1038	WP_114159401.1	PilW family protein	Machinery gene
NLHDIDDJ_RS17695 (NLHDIDDJ_03516)	pilV	3692016..3692516 (-)	501	WP_031380015.1	type IV pilus modification protein PilV	Machinery gene
NLHDIDDJ_RS17700 (NLHDIDDJ_03517)	fimU	3692513..3692962 (-)	450	WP_004745398.1	GspH/FimT family pseudopilin	Machinery gene
NLHDIDDJ_RS17705	-	3692868..3693119 (+)	252	Protein_3459	hypothetical protein	-
NLHDIDDJ_RS17710 (NLHDIDDJ_03518)	ispH	3693132..3694082 (-)	951	WP_000407064.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
NLHDIDDJ_RS17715 (NLHDIDDJ_03519)	gmk	3694205..3694834 (+)	630	WP_000015937.1	guanylate kinase	-
NLHDIDDJ_RS17720 (NLHDIDDJ_03520)	rpoZ	3694907..3695185 (+)	279	WP_000135049.1	DNA-directed RNA polymerase subunit omega	-
NLHDIDDJ_RS17725	-	3695224..3695354 (+)	131	Protein_3463	hypothetical protein	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37495.40 Da
• Isoelectric Point: 7.8380

>NTDB_id=538940 NLHDIDDJ_RS17690 WP_114159401.1 3690977..3692014(-) (pilW) [Acinetobacter baumannii strain RCH52]
MKKHQGFTLIELILSLALGLIITAAAILLFLTSQKSLSMQVGVSDLQDNANFGLNYLSQDIRLANLNNPKAVINDQTAYG
GIVLTSAINSAKDAANEPLSNLYKTIIGVTANTNLLSRSQGHSVGSGNAWTGASNVQSNGSDIASDQLVIQYVPQYTIDT
KSTATQADDEYIGGTDCEGNNLNFPLASGRQVIIQRYFLRKDAKNNSDEPNQPLALACDAGYYPLTGNPTAVTRYGDAGE
IIMKRVDYFRVLLNVQGNSGRRYISIHDYLNLTAPRPRIVSVQIGLLTRSLQPVGAEIAIKDDQQFSVLDQTITVKKPEN
STKKYVRQVISQTIALRNVIGERGE

Nucleotide

• Length: 1038 bp

>NTDB_id=538940 NLHDIDDJ_RS17690 WP_114159401.1 3690977..3692014(-) (pilW) [Acinetobacter baumannii strain RCH52]
ATGAAAAAACATCAAGGTTTTACATTAATCGAGTTAATACTTTCGTTAGCCTTAGGTCTTATAATTACTGCAGCTGCAAT
ATTATTATTTTTGACTAGTCAAAAAAGTTTATCTATGCAGGTCGGAGTATCTGATTTACAAGATAATGCTAATTTTGGAC
TTAACTATTTATCTCAAGATATTCGTCTTGCAAATTTAAATAACCCCAAAGCAGTTATTAATGATCAAACTGCTTATGGC
GGTATTGTTCTAACCTCTGCGATTAATTCAGCTAAAGATGCTGCTAATGAACCTCTTAGTAATCTATATAAAACTATTAT
TGGGGTAACTGCTAACACTAATTTACTTTCACGTAGTCAGGGACATAGTGTCGGTAGTGGTAATGCTTGGACGGGAGCGT
CAAATGTCCAAAGTAATGGAAGTGATATCGCTAGTGACCAACTCGTTATTCAATATGTACCACAATATACAATTGATACA
AAAAGTACTGCAACTCAAGCTGATGATGAATATATAGGCGGTACAGATTGCGAAGGAAATAATTTGAATTTTCCTCTTGC
TAGTGGGCGACAAGTCATAATCCAACGTTATTTTTTACGTAAAGACGCTAAAAATAATAGTGATGAACCTAACCAACCTT
TAGCACTTGCTTGTGATGCCGGCTATTACCCATTAACTGGTAACCCAACTGCTGTAACTCGTTATGGGGATGCAGGTGAA
ATTATAATGAAACGTGTGGATTATTTTCGGGTTTTACTAAATGTTCAAGGGAATTCTGGACGACGTTATATTTCAATACA
TGATTATTTGAACTTGACAGCACCTCGGCCACGTATTGTTTCAGTCCAAATTGGCTTATTAACACGTTCATTGCAACCTG
TAGGTGCAGAAATAGCAATTAAAGATGATCAACAATTTTCTGTATTAGATCAAACTATCACAGTAAAAAAACCTGAAAAT
TCGACAAAAAAATATGTGCGTCAAGTGATATCACAAACCATTGCCTTGCGTAATGTGATCGGGGAGCGTGGTGAATGA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-26)

• Type IV Pilus-assembly protein W (PilW) (197-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilW	Acinetobacter baumannii D1279779	39.889	100	0.417