Detailed information NTG0538812

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LJX82_RS21125
• Genome accession: NZ_CP085638
• Coordinates: 4373899..4374882 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain fEC.1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4368899..4379882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJX82_RS21100 (LJX82_21100)	-	4370048..4370155 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LJX82_RS21105 (LJX82_21105)	-	4370531..4370638 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LJX82_RS21110 (LJX82_21110)	-	4371014..4371121 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LJX82_RS21115 (LJX82_21115)	yhjV	4371597..4372868 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
LJX82_RS21120 (LJX82_21120)	dppF	4372898..4373902 (-)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LJX82_RS21125 (LJX82_21125)	amiE	4373899..4374882 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
LJX82_RS21130 (LJX82_21130)	dppC	4374893..4375795 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LJX82_RS21135 (LJX82_21135)	dppB	4375805..4376824 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LJX82_RS21140 (LJX82_21140)	dppA	4376975..4378582 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=538812 LJX82_RS21125 WP_001196496.1 4373899..4374882(-) (amiE) [Escherichia coli strain fEC.1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=538812 LJX82_RS21125 WP_001196496.1 4373899..4374882(-) (amiE) [Escherichia coli strain fEC.1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401