Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JQN60_RS14070 Genome accession   NZ_CP070222
Coordinates   2935849..2936454 (-) Length   201 a.a.
NCBI ID   WP_001202379.1    Uniprot ID   A0A734HUC9
Organism   Salmonella enterica subsp. enterica strain Se29     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2930849..2941454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQN60_RS14055 (JQN60_14055) helD 2931066..2933120 (-) 2055 WP_079806571.1 DNA helicase IV -
  JQN60_RS14060 (JQN60_14060) - 2933244..2933690 (+) 447 WP_079806572.1 YccF domain-containing protein -
  JQN60_RS14065 (JQN60_14065) yccS 2933709..2935862 (+) 2154 WP_023177838.1 YccS family putative transporter -
  JQN60_RS14070 (JQN60_14070) sxy/tfoX 2935849..2936454 (-) 606 WP_001202379.1 TfoX/Sxy family DNA transformation protein Regulator
  JQN60_RS14075 (JQN60_14075) sulA 2936671..2937180 (+) 510 WP_000288728.1 SOS-induced cell division inhibitor SulA -
  JQN60_RS14080 (JQN60_14080) ompA 2937537..2938589 (+) 1053 WP_023177836.1 porin OmpA -
  JQN60_RS14085 (JQN60_14085) matP 2938661..2939113 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  JQN60_RS14090 (JQN60_14090) - 2939299..2941059 (+) 1761 WP_023177834.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23160.85 Da        Isoelectric Point: 8.7403

>NTDB_id=538705 JQN60_RS14070 WP_001202379.1 2935849..2936454(-) (sxy/tfoX) [Salmonella enterica subsp. enterica strain Se29]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPVWLTFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRTLGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=538705 JQN60_RS14070 WP_001202379.1 2935849..2936454(-) (sxy/tfoX) [Salmonella enterica subsp. enterica strain Se29]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTATTGTGTGAAGCATCCTCCCGTCTGGCTCACGTTTATGAAGTGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAACAACTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAACACAGGCTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCACACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAGAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCGTTAGAAGGCGCAATTGTGGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A734HUC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

76.382

99.005

0.756