Detailed information NTG0538673

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LJU33_RS00925
• Genome accession: NZ_CP085637
• Coordinates: 193704..194687 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain fECg99.1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 188704..199687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJU33_RS00910 (LJU33_00910)	dppA	190004..191611 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
LJU33_RS00915 (LJU33_00915)	dppB	191762..192781 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LJU33_RS00920 (LJU33_00920)	dppC	192791..193693 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LJU33_RS00925 (LJU33_00925)	amiE	193704..194687 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LJU33_RS00930 (LJU33_00930)	dppF	194684..195688 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LJU33_RS00935 (LJU33_00935)	yhjV	195718..196989 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
LJU33_RS00940 (LJU33_00940)	-	197465..197572 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LJU33_RS00945 (LJU33_00945)	-	197948..198055 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LJU33_RS00950 (LJU33_00950)	-	198431..198538 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LJU33_RS00955 (LJU33_00955)	-	198914..199021 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=538673 LJU33_RS00925 WP_001196486.1 193704..194687(+) (amiE) [Escherichia coli strain fECg99.1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=538673 LJU33_RS00925 WP_001196486.1 193704..194687(+) (amiE) [Escherichia coli strain fECg99.1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404