Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6K60_RS04090 Genome accession   NZ_CP070177
Coordinates   883022..883618 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain FDAARGOS_1330     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 878022..888618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K60_RS04070 (I6K60_04070) - 878214..879971 (-) 1758 WP_032414743.1 AAA family ATPase -
  I6K60_RS04075 (I6K60_04075) matP 880157..880609 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  I6K60_RS04080 (I6K60_04080) ompA 880741..881811 (-) 1071 WP_002898408.1 porin OmpA -
  I6K60_RS04085 (I6K60_04085) sulA 882164..882673 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  I6K60_RS04090 (I6K60_04090) sxy/tfoX 883022..883618 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  I6K60_RS04095 (I6K60_04095) yccS 883632..885767 (-) 2136 WP_032414745.1 YccS family putative transporter -
  I6K60_RS04100 (I6K60_04100) - 885785..886231 (-) 447 WP_002898425.1 YccF domain-containing protein -
  I6K60_RS04105 (I6K60_04105) helD 886356..888410 (+) 2055 WP_032414747.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=538670 I6K60_RS04090 WP_004150836.1 883022..883618(+) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1330]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=538670 I6K60_RS04090 WP_004150836.1 883022..883618(+) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1330]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51