Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | M3Q_RS09950 | Genome accession | NC_018706 |
| Coordinates | 2076131..2076511 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii TYTH-1 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2071131..2081511
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3Q_RS09920 (M3Q_1956) | kdsB | 2072034..2072795 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| M3Q_RS09925 (M3Q_1957) | - | 2072807..2073787 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| M3Q_RS09930 (M3Q_1958) | - | 2073799..2074140 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| M3Q_RS09935 (M3Q_1959) | - | 2074158..2074931 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| M3Q_RS09940 (M3Q_1960) | - | 2074969..2075577 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| M3Q_RS09945 (M3Q_1961) | - | 2075587..2076141 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| M3Q_RS09950 (M3Q_1962) | xcpV | 2076131..2076511 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| M3Q_RS09955 (M3Q_1963) | xcpW | 2076511..2077212 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| M3Q_RS09960 (M3Q_1964) | gspK | 2077212..2078171 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| M3Q_RS09965 (M3Q_1965) | - | 2078402..2078998 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| M3Q_RS09970 (M3Q_1966) | ung | 2079049..2079762 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| M3Q_RS09975 (M3Q_1967) | - | 2079759..2080883 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| M3Q_RS09980 (M3Q_1968) | tadA | 2080890..2081393 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=53859 M3Q_RS09950 WP_000836911.1 2076131..2076511(+) (xcpV) [Acinetobacter baumannii TYTH-1]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=53859 M3Q_RS09950 WP_000836911.1 2076131..2076511(+) (xcpV) [Acinetobacter baumannii TYTH-1]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |