Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LI754_RS10305 Genome accession   NZ_CP085320
Coordinates   2075612..2076430 (-) Length   272 a.a.
NCBI ID   WP_044290495.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CJFA-182     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2070612..2081430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LI754_RS10285 - 2071705..2072682 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  LI754_RS10290 - 2072943..2073779 (-) 837 WP_000886465.1 membrane protein -
  LI754_RS10295 - 2073788..2075305 (-) 1518 WP_044290489.1 ABC transporter ATP-binding protein -
  LI754_RS10300 - 2075320..2075634 (-) 315 WP_000435806.1 YfhH family protein -
  LI754_RS10305 recX 2075612..2076430 (-) 819 WP_044290495.1 recombination regulator RecX Regulator
  LI754_RS10310 sgtB 2076691..2077500 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  LI754_RS10315 - 2077840..2078355 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  LI754_RS10320 - 2078485..2078646 (-) 162 WP_044290500.1 SE1561 family protein -
  LI754_RS10325 yfkAB 2078870..2080021 (+) 1152 WP_044290502.1 radical SAM/CxCxxxxC motif protein YfkAB -
  LI754_RS10330 - 2080281..2080811 (-) 531 WP_044290503.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32273.12 Da        Isoelectric Point: 5.9231

>NTDB_id=538413 LI754_RS10305 WP_044290495.1 2075612..2076430(-) (recX) [Staphylococcus aureus strain CJFA-182]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTEKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=538413 LI754_RS10305 WP_044290495.1 2075612..2076430(-) (recX) [Staphylococcus aureus strain CJFA-182]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGAAAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993