Detailed information NTG0538311

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6K95_RS19325
• Genome accession: NZ_CP070101
• Coordinates: 4048285..4049388 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain FDAARGOS_1365
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4043285..4054388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K95_RS19300 (I6K95_19300)	-	4045162..4045548 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
I6K95_RS19305 (I6K95_19305)	-	4045556..4046689 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
I6K95_RS19310 (I6K95_19310)	-	4046753..4047004 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
I6K95_RS19315 (I6K95_19315)	coaD	4047059..4047568 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
I6K95_RS19320 (I6K95_19320)	rsmD	4047589..4048209 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6K95_RS19325 (I6K95_19325)	pilA	4048285..4049388 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
I6K95_RS19330 (I6K95_19330)	-	4049435..4051033 (-)	1599	Protein_3817	CYTH and CHAD domain-containing protein	-
I6K95_RS19335 (I6K95_19335)	phnE	4051216..4052037 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
I6K95_RS19340 (I6K95_19340)	phnE	4052034..4052903 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
I6K95_RS19345 (I6K95_19345)	-	4052921..4053406 (-)	486	Protein_3820	phosphonate ABC transporter ATP-binding protein	-
I6K95_RS19350 (I6K95_19350)	-	4053400..4054350 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=538311 I6K95_RS19325 WP_023853086.1 4048285..4049388(+) (pilA) [Bordetella pertussis strain FDAARGOS_1365]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=538311 I6K95_RS19325 WP_023853086.1 4048285..4049388(+) (pilA) [Bordetella pertussis strain FDAARGOS_1365]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507