Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   LI911_RS01430 Genome accession   NZ_CP085318
Coordinates   249777..251057 (-) Length   426 a.a.
NCBI ID   WP_323147753.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CKFA-361     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 244777..256057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LI911_RS01415 - 247062..247154 (+) 93 WP_001789987.1 hypothetical protein -
  LI911_RS01420 - 247134..248039 (-) 906 WP_000184371.1 transglycosylase domain-containing protein -
  LI911_RS01425 tyrS 248421..249683 (+) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  LI911_RS01430 htrA 249777..251057 (-) 1281 WP_323147753.1 S1C family serine protease Regulator
  LI911_RS01435 - 251229..251846 (+) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  LI911_RS01440 nagE 251974..253440 (+) 1467 WP_000276367.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  LI911_RS01445 - 253547..254677 (+) 1131 WP_000721707.1 HAD family hydrolase -
  LI911_RS01450 - 254638..254733 (-) 96 WP_031789489.1 hypothetical protein -

Sequence

Protein


Download         Length: 426 a.a.        Molecular weight: 46052.34 Da        Isoelectric Point: 10.0879

>NTDB_id=538260 LI911_RS01430 WP_323147753.1 249777..251057(-) (htrA) [Staphylococcus aureus strain CKFA-361]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKAHSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKVKLK
QQKEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1281 bp        

>NTDB_id=538260 LI911_RS01430 WP_323147753.1 249777..251057(-) (htrA) [Staphylococcus aureus strain CKFA-361]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACTATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTCATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTTAAAGTGAAATTAAAA
CAACAAAAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATA
A

Domains

Predicted by InterProScan.

Trypsin-like peptidase domain (Trypsin_2)

(125-269)

PDZ domain (PDZ_2)

(307-397)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.055

94.366

0.369