Detailed information NTG0053801

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SPB_RS04090
• Genome accession: NZ_AEUT02000001
• Coordinates: 806608..808815 (-)
• Length: 735 a.a.
• NCBI ID: WP_003103646.1
• Uniprot ID: -
• Organism: Streptococcus parauberis NCFD 2020
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 801608..813815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPB_RS04060 (SPB_0836)	-	802229..803017 (-)	789	WP_003102431.1	Nif3-like dinuclear metal center hexameric protein	-
SPB_RS04065 (SPB_0837)	-	803007..803690 (-)	684	WP_003103141.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
SPB_RS04070 (SPB_0838)	-	803786..804430 (-)	645	WP_003105875.1	CPBP family intramembrane glutamic endopeptidase	-
SPB_RS04075 (SPB_0839)	nth	804566..805213 (-)	648	WP_003105062.1	endonuclease III	-
SPB_RS04080 (SPB_0840)	-	805210..805890 (-)	681	WP_003103839.1	DnaD domain-containing protein	-
SPB_RS04085 (SPB_0841)	-	805955..806473 (-)	519	WP_003102723.1	adenine phosphoribosyltransferase	-
SPB_RS04090 (SPB_0842)	recJ	806608..808815 (-)	2208	WP_003103646.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SPB_RS04095 (SPB_0843)	-	808812..809576 (-)	765	WP_003102434.1	SDR family oxidoreductase	-
SPB_RS04100 (SPB_0844)	rnz	809576..810505 (-)	930	WP_003103329.1	ribonuclease Z	-
SPB_RS04105 (SPB_0845)	-	810520..811164 (-)	645	WP_003105761.1	hypothetical protein	-
SPB_RS04110 (SPB_0846)	hflX	811157..812395 (-)	1239	WP_096633746.1	GTPase HflX	-
SPB_RS04115 (SPB_0847)	miaA	812483..813373 (-)	891	WP_003103573.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SPB_RS11000 (SPB_0848)	-	813507..813683 (+)	177	WP_003103674.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82515.07 Da
• Isoelectric Point: 4.4822

>NTDB_id=53801 SPB_RS04090 WP_003103646.1 806608..808815(-) (recJ) [Streptococcus parauberis NCFD 2020]
MIRAKYDWIINEKKPDDGFFKLAKKKSLSQDICRLLYDRGIDDEKKLDHFLRADLSDLNDPYLLNDMDKAVNRIRTAIEN
FEQILVYGDYDADGMTSASIMKETLEMMGAEALIYLPNRFTDGYGPNESVYKYFIEQNQVSLIITVDNGVAGHEAIAYAQ
AAGVDVIVTDHHSLPDQLPQAYAVIHPEHPEADYPFKKLAGCGVAFKLACALLETVPTEFLDLVAIGTIADMVSLTDENR
VLVKNGLKVLKMSERQGLQELMTISGVDLDAIDEDTVGFKIAPQLNALGRLDDPNPAIELLTGFDDEEAHDIALMINEKN
EERKSLVQTIYNEAVEMVDLSKPVQVLAKAGWHPGVLGIVAGRILEEISQTVIVLNIENGVAKGSARSIEAINIFDALNH
QRELMTAFGGHSGAAGMTLPAENIQALSESITDYVVSEKIDISQKNSLKIDSWLDLDHLSLEFLKELNILAPFGMDNKKP
VFALKDFTVVQARTMGADQSHLKLRIKNGSVETDVVAFNQGQYHLEYSQLADLELAVTLTVNSWNGNTSLQLMLVDARAT
KSPQLFDFRARNMTLPNDISDIMVENDGQEVAIIDLPEDLEALRLQFQKRHFEAIYFKNNIDKPYYLSGSGSKDQFARLY
KTIYQFPEFDVRFKLSQLSDYLKIEKYLLVKMIQIFNELGFVAIDNGLMTVNKDASKRDIADSKTYQELQKLVKYQELMS
LGTPQEIYDFLVNED

Nucleotide

• Length: 2208 bp

>NTDB_id=53801 SPB_RS04090 WP_003103646.1 806608..808815(-) (recJ) [Streptococcus parauberis NCFD 2020]
ATGATAAGAGCCAAATATGATTGGATTATAAATGAAAAGAAGCCAGATGATGGCTTCTTTAAACTAGCAAAGAAAAAAAG
TCTTAGTCAAGACATATGTCGGCTCCTTTATGATAGAGGAATTGATGATGAAAAAAAATTAGACCATTTTCTTCGGGCCG
ACCTTTCTGACTTAAACGATCCCTATTTATTAAATGATATGGACAAAGCGGTGAACAGAATTCGGACCGCCATTGAAAAC
TTTGAACAGATTTTAGTTTATGGAGATTATGATGCTGATGGGATGACATCGGCATCCATCATGAAAGAAACACTTGAAAT
GATGGGAGCTGAGGCTTTAATCTACCTCCCCAACCGTTTTACAGATGGTTATGGTCCAAATGAAAGCGTCTATAAGTATT
TCATTGAGCAAAACCAAGTTAGTTTAATTATTACAGTTGATAATGGGGTTGCGGGTCACGAGGCCATTGCTTACGCGCAA
GCAGCAGGTGTTGATGTGATTGTCACGGACCATCACTCTCTACCTGATCAATTACCACAAGCTTACGCAGTTATTCACCC
AGAACATCCAGAAGCTGACTATCCTTTTAAAAAATTAGCCGGCTGTGGCGTTGCTTTTAAACTGGCCTGCGCCCTGCTAG
AAACAGTTCCAACTGAATTTCTGGATTTAGTGGCTATTGGTACTATTGCGGATATGGTTTCCTTAACGGATGAAAATCGC
GTTTTAGTAAAGAATGGCTTGAAAGTCCTAAAAATGAGTGAACGGCAAGGTTTACAAGAATTAATGACTATTTCAGGAGT
TGATTTAGACGCTATTGATGAGGATACTGTTGGTTTTAAAATTGCCCCGCAATTAAATGCTCTAGGTCGCTTAGATGATC
CTAATCCAGCAATTGAACTCTTGACTGGATTTGATGATGAAGAAGCCCATGACATTGCCCTCATGATTAATGAAAAAAAC
GAAGAGCGTAAAAGCTTGGTTCAAACTATTTATAATGAAGCTGTTGAGATGGTTGACTTAAGTAAACCAGTTCAAGTTCT
GGCTAAGGCCGGCTGGCATCCTGGTGTACTTGGGATTGTTGCTGGGAGAATTCTTGAAGAAATCAGTCAAACAGTTATCG
TCTTGAATATTGAAAATGGGGTTGCTAAAGGCTCTGCTCGCTCAATAGAGGCTATTAATATATTTGATGCCTTAAATCAT
CAACGAGAATTGATGACTGCTTTTGGTGGTCACAGTGGTGCAGCTGGGATGACCTTACCAGCTGAAAATATTCAAGCTTT
ATCAGAATCCATAACTGATTACGTTGTCTCTGAAAAGATTGATATAAGTCAAAAAAATAGTTTAAAAATTGATAGTTGGT
TAGATCTTGATCACTTGAGTTTGGAATTCTTGAAAGAATTGAATATCTTAGCTCCATTTGGCATGGACAATAAAAAACCT
GTTTTTGCTCTCAAAGATTTCACAGTTGTTCAAGCACGGACTATGGGTGCTGATCAAAGTCACTTGAAGCTCCGGATAAA
AAATGGTTCAGTTGAAACTGATGTTGTTGCCTTTAATCAAGGACAATATCATTTAGAATATAGTCAACTGGCTGATTTAG
AATTGGCCGTGACTTTGACAGTTAATTCTTGGAATGGAAACACCAGTCTTCAGCTTATGTTAGTCGATGCCAGGGCTACC
AAAAGTCCGCAATTATTTGATTTCAGGGCTAGAAATATGACTTTGCCGAATGATATTTCAGATATCATGGTGGAAAATGA
TGGTCAGGAAGTAGCTATTATTGATTTGCCAGAGGATTTGGAGGCTTTGCGCCTGCAATTCCAAAAGAGACATTTTGAAG
CTATTTACTTCAAAAATAATATTGATAAGCCTTATTATCTTTCCGGTTCTGGTAGTAAGGATCAGTTTGCAAGATTATAT
AAAACGATTTACCAATTTCCGGAATTTGATGTTCGTTTTAAATTAAGTCAGTTAAGTGATTACTTGAAAATTGAAAAATA
TCTTTTAGTTAAAATGATTCAAATTTTTAATGAATTAGGTTTTGTTGCAATTGATAATGGTTTAATGACGGTTAATAAGG
ATGCATCAAAACGTGACATCGCGGATAGTAAAACTTATCAAGAATTACAAAAACTAGTTAAGTATCAAGAGCTAATGTCA
CTTGGAACACCGCAAGAAATTTATGATTTTTTGGTTAATGAAGATTAA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (317-433)

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (585-727)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	62.483	100	0.63
recJ	Bacillus subtilis subsp. subtilis str. 168	36.856	100	0.389