Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6K52_RS05685 Genome accession   NZ_CP070037
Coordinates   1122023..1122619 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain FDAARGOS_1322     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1117023..1127619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K52_RS05670 (I6K52_05670) helD 1117231..1119285 (-) 2055 WP_004179218.1 DNA helicase IV -
  I6K52_RS05675 (I6K52_05675) - 1119410..1119856 (+) 447 WP_002898425.1 YccF domain-containing protein -
  I6K52_RS05680 (I6K52_05680) yccS 1119874..1122009 (+) 2136 WP_002898422.1 YccS family putative transporter -
  I6K52_RS05685 (I6K52_05685) sxy/tfoX 1122023..1122619 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  I6K52_RS05690 (I6K52_05690) sulA 1122968..1123477 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  I6K52_RS05695 (I6K52_05695) ompA 1123830..1124900 (+) 1071 WP_002898408.1 porin OmpA -
  I6K52_RS05700 (I6K52_05700) matP 1125031..1125483 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  I6K52_RS05705 (I6K52_05705) - 1125669..1127426 (+) 1758 WP_020804925.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=537933 I6K52_RS05685 WP_004150836.1 1122023..1122619(-) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1322]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=537933 I6K52_RS05685 WP_004150836.1 1122023..1122619(-) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1322]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCCATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51