Detailed information
Bioinformatically predicted
Overview
| Name | xerS | Type | Machinery gene |
| Locus tag | SPB_RS02760 | Genome accession | NZ_AEUT02000001 |
| Coordinates | 555942..557012 (+) | Length | 356 a.a. |
| NCBI ID | WP_003104890.1 | Uniprot ID | - |
| Organism | Streptococcus parauberis NCFD 2020 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 550942..562012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPB_RS02735 (SPB_0561) | - | 551577..552359 (+) | 783 | WP_003105439.1 | threonine/serine exporter ThrE family protein | - |
| SPB_RS02740 (SPB_0562) | - | 552350..552799 (+) | 450 | WP_003103682.1 | threonine/serine exporter family protein | - |
| SPB_RS02745 (SPB_0563) | - | 552789..554054 (-) | 1266 | WP_254655062.1 | peptidoglycan bridge formation glycyltransferase FemA/FemB family protein | - |
| SPB_RS02750 (SPB_0564) | - | 554343..554561 (+) | 219 | WP_003102769.1 | hypothetical protein | - |
| SPB_RS02755 (SPB_0565) | - | 554741..555163 (+) | 423 | WP_003102761.1 | YcjF family protein | - |
| SPB_RS02760 (SPB_0566) | xerS | 555942..557012 (+) | 1071 | WP_003104890.1 | tyrosine recombinase XerS | Machinery gene |
| SPB_RS02765 (SPB_0567) | - | 557085..558233 (-) | 1149 | WP_003104137.1 | NADH-dependent flavin oxidoreductase | - |
| SPB_RS02770 | - | 558345..558602 (-) | 258 | WP_254655063.1 | hypothetical protein | - |
| SPB_RS02775 (SPB_0568) | - | 558661..558996 (-) | 336 | WP_003103364.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| SPB_RS02780 (SPB_0570) | - | 559234..559812 (-) | 579 | WP_003104595.1 | NUDIX domain-containing protein | - |
| SPB_RS02785 (SPB_0571) | - | 559963..560910 (-) | 948 | WP_003104955.1 | HAMP domain-containing sensor histidine kinase | - |
| SPB_RS02790 (SPB_0572) | braR | 560907..561572 (-) | 666 | WP_003105928.1 | response regulator transcription factor | Regulator |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41545.69 Da Isoelectric Point: 9.6821
>NTDB_id=53792 SPB_RS02760 WP_003104890.1 555942..557012(+) (xerS) [Streptococcus parauberis NCFD 2020]
MRRELLLKKIEDYKSIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYKRFFEWLIDADISNVTKIADIDLSTLEHLTKKDME
AFVLYLRERPSLNTYSTKSGVSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMEFLEYVDNEYENLLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDVKDLNLKMMVIEVTRKGGKRDS
VNVAGFAKPYIENYLAIRKNRYKAEKQDLAFFLTEYRGVPNRIDASSIEKMVAKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL
MRRELLLKKIEDYKSIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYKRFFEWLIDADISNVTKIADIDLSTLEHLTKKDME
AFVLYLRERPSLNTYSTKSGVSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMEFLEYVDNEYENLLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDVKDLNLKMMVIEVTRKGGKRDS
VNVAGFAKPYIENYLAIRKNRYKAEKQDLAFFLTEYRGVPNRIDASSIEKMVAKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL
Nucleotide
Download Length: 1071 bp
>NTDB_id=53792 SPB_RS02760 WP_003104890.1 555942..557012(+) (xerS) [Streptococcus parauberis NCFD 2020]
ATGAGACGTGAATTACTTTTAAAAAAAATTGAAGACTATAAATCAATTATGCCTTGGTATGTTTTAGATTATTATCAATC
TAAATTGTCAGTGCCTTATAGTTTTACAACCTTATATGAATATCTTAAGGAATATAAACGTTTCTTTGAATGGTTAATTG
ATGCTGACATCTCAAATGTTACTAAAATTGCTGATATTGATTTATCTACTTTGGAACATTTGACTAAGAAAGATATGGAG
GCTTTTGTTCTTTATTTACGTGAACGTCCTTCTCTTAATACATACTCAACTAAGTCTGGTGTCTCACAAACGACCATTAA
CAGAACTTTGTCTGCCTTATCCAGTCTCTACAAGTATTTGACTGAGGAGGTTGAAAATGACCAAGGGGAACCTTATTTCT
ACAGAAATGTCATGAAAAAGGTCTCTACTAAGAAAAAAAAAGAAACTTTAGCCTCACGGGCTGAAAATATTAAGCAAAAA
CTCTTCTTAGGTGACGAAACCATGGAATTTCTGGAGTATGTTGATAATGAGTACGAAAATTTACTGTCAAATCGAGCTAA
ATCATCTTTCCGAAAAAATAAGGAACGTGATCTTGCTATTATTGCGCTTCTTCTTGCTTCTGGCGTTCGACTCTCAGAAG
CTGTCAACCTTGATGTAAAAGACTTGAATCTAAAAATGATGGTCATCGAGGTAACGCGTAAGGGTGGAAAACGTGATTCT
GTCAACGTTGCTGGCTTTGCCAAACCATATATCGAGAATTATTTAGCCATTCGCAAGAACCGGTACAAGGCGGAAAAACA
AGATCTTGCTTTCTTTCTAACTGAGTATCGCGGTGTTCCTAATCGAATTGATGCCTCTTCTATAGAAAAAATGGTTGCTA
AGTACTCACAAGATTTCAAAATCCGGGTTACGCCCCATAAATTACGCCATACACTGGCTACCAGACTTTATGATGCAACC
AAGTCTCAGGTCTTAGTTAGTCACCAATTAGGCCATGCCTCTACACAGGTTACTGACCTTTATACCCATATCGTCAATGA
CGAACAAAAAAATGCCTTGGATAAATTATAA
ATGAGACGTGAATTACTTTTAAAAAAAATTGAAGACTATAAATCAATTATGCCTTGGTATGTTTTAGATTATTATCAATC
TAAATTGTCAGTGCCTTATAGTTTTACAACCTTATATGAATATCTTAAGGAATATAAACGTTTCTTTGAATGGTTAATTG
ATGCTGACATCTCAAATGTTACTAAAATTGCTGATATTGATTTATCTACTTTGGAACATTTGACTAAGAAAGATATGGAG
GCTTTTGTTCTTTATTTACGTGAACGTCCTTCTCTTAATACATACTCAACTAAGTCTGGTGTCTCACAAACGACCATTAA
CAGAACTTTGTCTGCCTTATCCAGTCTCTACAAGTATTTGACTGAGGAGGTTGAAAATGACCAAGGGGAACCTTATTTCT
ACAGAAATGTCATGAAAAAGGTCTCTACTAAGAAAAAAAAAGAAACTTTAGCCTCACGGGCTGAAAATATTAAGCAAAAA
CTCTTCTTAGGTGACGAAACCATGGAATTTCTGGAGTATGTTGATAATGAGTACGAAAATTTACTGTCAAATCGAGCTAA
ATCATCTTTCCGAAAAAATAAGGAACGTGATCTTGCTATTATTGCGCTTCTTCTTGCTTCTGGCGTTCGACTCTCAGAAG
CTGTCAACCTTGATGTAAAAGACTTGAATCTAAAAATGATGGTCATCGAGGTAACGCGTAAGGGTGGAAAACGTGATTCT
GTCAACGTTGCTGGCTTTGCCAAACCATATATCGAGAATTATTTAGCCATTCGCAAGAACCGGTACAAGGCGGAAAAACA
AGATCTTGCTTTCTTTCTAACTGAGTATCGCGGTGTTCCTAATCGAATTGATGCCTCTTCTATAGAAAAAATGGTTGCTA
AGTACTCACAAGATTTCAAAATCCGGGTTACGCCCCATAAATTACGCCATACACTGGCTACCAGACTTTATGATGCAACC
AAGTCTCAGGTCTTAGTTAGTCACCAATTAGGCCATGCCTCTACACAGGTTACTGACCTTTATACCCATATCGTCAATGA
CGAACAAAAAAATGCCTTGGATAAATTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xerS | Streptococcus pneumoniae R6 |
82.865 |
100 |
0.829 |