Detailed information
Bioinformatically predicted
Overview
| Name | uvrA | Type | Machinery gene |
| Locus tag | LIN98_RS03010 | Genome accession | NZ_CP085096 |
| Coordinates | 590591..593422 (+) | Length | 943 a.a. |
| NCBI ID | WP_005543937.1 | Uniprot ID | A0A142G045 |
| Organism | Aggregatibacter actinomycetemcomitans strain 4S | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 585591..598422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIN98_RS02985 | comE | 585717..587126 (+) | 1410 | WP_050846294.1 | type IV pilus secretin PilQ | Machinery gene |
| LIN98_RS02990 | aroK | 587340..587867 (+) | 528 | WP_005555432.1 | shikimate kinase AroK | - |
| LIN98_RS02995 | aroB | 587891..588979 (+) | 1089 | WP_005569125.1 | 3-dehydroquinate synthase | - |
| LIN98_RS03000 | - | 588982..589836 (+) | 855 | WP_005544984.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LIN98_RS03005 | ssb | 589942..590421 (-) | 480 | WP_014167545.1 | single-stranded DNA-binding protein | Machinery gene |
| LIN98_RS03010 | uvrA | 590591..593422 (+) | 2832 | WP_005543937.1 | excinuclease ABC subunit UvrA | Machinery gene |
| LIN98_RS03015 | - | 593494..593866 (+) | 373 | Protein_582 | helix-turn-helix domain-containing protein | - |
| LIN98_RS03020 | - | 593863..594669 (+) | 807 | WP_249847582.1 | IS3 family transposase | - |
| LIN98_RS03025 | - | 594746..595156 (-) | 411 | WP_005589530.1 | MerR family transcriptional regulator | - |
| LIN98_RS03030 | - | 595277..595588 (-) | 312 | WP_005544590.1 | DciA family protein | - |
| LIN98_RS03035 | secM | 595680..595997 (+) | 318 | WP_005544588.1 | secA translation cis-regulator SecM | - |
Sequence
Protein
Download Length: 943 a.a. Molecular weight: 104420.29 Da Isoelectric Point: 7.1443
>NTDB_id=537826 LIN98_RS03010 WP_005543937.1 590591..593422(+) (uvrA) [Aggregatibacter actinomycetemcomitans strain 4S]
MDTIDIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPHHHVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKERKG
EHVKLLQQIAAQGYIRARIDGEICDLSDPPKLELHKKHTIEVVVDRFKVRSDLATRLAESFETTLELSGGTAVVAYMDDP
KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPNISLANGAIKGWDRRNFYYYQM
LTSLSKHYHFDIETPFEALPKKIQQIILNGSGKEEIEFQYMNDRGDVVLRRHAFEGILNNMARRYKETESMSVREELAKH
ISNRPCADCGGSRLRPEARNVYIEQTNLPEVSEKSIGEALDFFGDLQLSGQKAQIAEKILKEIKERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAILSADHIIDI
GPGAGVHGGSVIAEGTAQQIMQNPNSLTGKFLSGTEKIEIPKKRTALDKKKMLKLFGASGNNLKNVNLDIPVGLFTCITG
VSGSGKSTLINDTLFPIAQNALNRAENAEVSPYKSIKGLEFFDKVIDINQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEDAREFF
DAIPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHRLRD
QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEQVAKMEGSHTARFLKEILAKG
MDTIDIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPHHHVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKERKG
EHVKLLQQIAAQGYIRARIDGEICDLSDPPKLELHKKHTIEVVVDRFKVRSDLATRLAESFETTLELSGGTAVVAYMDDP
KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPNISLANGAIKGWDRRNFYYYQM
LTSLSKHYHFDIETPFEALPKKIQQIILNGSGKEEIEFQYMNDRGDVVLRRHAFEGILNNMARRYKETESMSVREELAKH
ISNRPCADCGGSRLRPEARNVYIEQTNLPEVSEKSIGEALDFFGDLQLSGQKAQIAEKILKEIKERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAILSADHIIDI
GPGAGVHGGSVIAEGTAQQIMQNPNSLTGKFLSGTEKIEIPKKRTALDKKKMLKLFGASGNNLKNVNLDIPVGLFTCITG
VSGSGKSTLINDTLFPIAQNALNRAENAEVSPYKSIKGLEFFDKVIDINQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEDAREFF
DAIPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHRLRD
QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEQVAKMEGSHTARFLKEILAKG
Nucleotide
Download Length: 2832 bp
>NTDB_id=537826 LIN98_RS03010 WP_005543937.1 590591..593422(+) (uvrA) [Aggregatibacter actinomycetemcomitans strain 4S]
ATGGATACCATCGACATTCGTGGGGCACGAACCCACAATCTGAAAAATATTAACTTAACCATTCCACGCGACAAACTTAT
CGTTATCACCGGTTTATCCGGTTCGGGCAAGTCTTCGCTGGCGTTTGATACCCTGTATGCGGAAGGACAACGCCGTTATG
TGGAATCCCTTTCTGCCTATGCGCGCCAGTTTCTGTCATTAATGGAAAAGCCTGATGTGGACCACATTGAAGGGCTTTCA
CCGGCGATTTCCATTGAGCAAAAATCCACCTCCCATAACCCGCGTTCAACGGTGGGGACGATTACCGAAATTCATGATTA
CCTGCGTTTATTGTTTGCCCGCGTGGGCGAACCGCGCTGTCCGCATCATCATGTTCCACTCACCGCGCAAACCATCAGCC
AAATGGTGGATAAAGTACTTTCCCTGCCGGAAGACAGCAAAATGATGCTGTTGGCACCGGTGGTGAAAGAACGCAAAGGC
GAACACGTTAAGCTGTTGCAACAAATTGCCGCACAAGGTTACATTCGCGCCCGTATCGATGGCGAAATTTGTGATTTATC
CGATCCACCGAAACTGGAATTACATAAAAAACACACTATTGAAGTGGTGGTGGATCGCTTTAAAGTGCGGTCGGATTTAG
CCACAAGATTGGCGGAATCCTTTGAAACCACGTTGGAATTATCGGGCGGCACGGCAGTGGTTGCCTACATGGACGATCCG
AAAGCGGAAGAGTTGGTGTTCTCCGCCAACTTTGCCTGCCCCCATTGCGGCTACTCCGTGCCGGAACTGGAACCGCGTCT
GTTTTCCTTCAATAACCCGGCAGGGGCGTGTCCGACCTGCGACGGTTTAGGCGTGCAGCAATATTTTGATGAAAAACGCG
TGGTGCAAAATCCGAACATTTCCCTTGCCAACGGCGCCATTAAAGGCTGGGATCGCCGTAATTTTTATTATTATCAAATG
CTCACTTCCCTCTCGAAACACTACCATTTCGACATAGAAACCCCGTTTGAAGCATTACCGAAAAAAATCCAACAGATTAT
TTTGAATGGTTCCGGCAAGGAAGAAATCGAGTTTCAATACATGAACGATCGCGGCGATGTGGTGCTGCGTCGCCACGCCT
TTGAAGGGATTTTGAACAACATGGCGCGCCGTTATAAAGAAACGGAATCCATGTCGGTGCGCGAAGAACTCGCCAAACAC
ATCAGCAACCGCCCGTGCGCCGATTGCGGCGGTTCCCGCTTACGCCCGGAAGCGCGCAATGTATATATTGAACAAACCAA
CCTGCCGGAGGTGTCGGAAAAAAGCATCGGTGAAGCGTTAGATTTCTTCGGCGATTTACAGCTCAGCGGGCAAAAAGCCC
AAATCGCCGAAAAAATCCTGAAAGAGATAAAAGAGCGGTTACAATTTTTAGTGAATGTAGGCTTGAATTATCTTTCCCTT
TCCCGCTCTGCCGAAACCCTTTCTGGCGGTGAAGCACAACGGATTCGCCTCGCCAGCCAAATCGGCGCAGGATTAGTGGG
TGTGATGTACGTGTTGGATGAACCCTCCATCGGCTTGCACCAACGGGACAATGAACGCCTGCTTAACACGCTGATTCATT
TGCGTAATTTAGGCAATACAGTAATCGTGGTGGAACATGACGAAGACGCCATTTTGAGCGCCGACCACATTATCGACATC
GGACCGGGCGCCGGCGTGCACGGAGGTAGCGTCATCGCCGAAGGCACCGCACAACAAATCATGCAAAATCCGAATTCCCT
CACGGGTAAATTTTTATCGGGCACGGAAAAGATCGAAATACCGAAAAAACGTACCGCACTTGATAAGAAAAAAATGCTCA
AATTGTTCGGCGCTTCCGGTAACAACCTGAAAAACGTCAATTTAGACATTCCCGTGGGCTTATTTACCTGCATCACCGGC
GTGTCCGGTTCAGGTAAATCTACACTGATTAACGACACTCTGTTCCCTATTGCACAAAACGCCTTGAATCGTGCAGAAAA
TGCCGAGGTATCGCCGTACAAGTCCATTAAAGGTTTGGAATTTTTCGATAAAGTTATTGATATTAACCAAAGCCCGATTG
GACGCACGCCACGCTCCAACCCGGCAACTTACACGGGCGTATTCACGCCGATTCGCGAACTGTTTGCCGGCGTACCGGAA
GCCCGTGCGCGCGGTTATAACCCGGGGCGTTTCAGTTTTAACGTGCGCGGCGGGCGCTGTGAAGCCTGCCAGGGCGACGG
CGTAATCAAAGTGGAAATGCACTTCCTGCCCGATGTGTACGTGCCTTGCGACCAATGTAAAGGCAAGCGTTACAATCGCG
AAACCCTGGAAATCCGCTACAAAGGTAAAACCATTCATCAGGTGCTGGACATGACGGTGGAAGATGCGCGCGAGTTTTTC
GATGCCATTCCAATGATTGCGCGTAAATTGCAAACCCTGATTGACGTGGGCTTGTCTTATATTCGCTTGGGGCAATCCTC
TACCACCCTGTCCGGCGGGGAAGCGCAACGGGTGAAACTGGCGACGGAACTCTCCAAACGGGATACGGGCAAAACCCTGT
ATATTCTGGACGAACCGACCACAGGGCTGCATTTTGCCGACATTAAACAATTGCTTTCCGTGTTACACCGTTTACGCGAT
CAAGGCAACACCATCGTGGTCATTGAGCATAATTTAGACGTGATTAAAACCGCCGACTGGATTGTAGATCTCGGCCCTGA
AGGCGGCAGCGGCGGCGGACAAATTATCGCGACCGGCACACCGGAACAGGTTGCCAAAATGGAGGGCTCGCACACCGCCC
GCTTCCTCAAAGAGATTTTGGCAAAAGGCTAA
ATGGATACCATCGACATTCGTGGGGCACGAACCCACAATCTGAAAAATATTAACTTAACCATTCCACGCGACAAACTTAT
CGTTATCACCGGTTTATCCGGTTCGGGCAAGTCTTCGCTGGCGTTTGATACCCTGTATGCGGAAGGACAACGCCGTTATG
TGGAATCCCTTTCTGCCTATGCGCGCCAGTTTCTGTCATTAATGGAAAAGCCTGATGTGGACCACATTGAAGGGCTTTCA
CCGGCGATTTCCATTGAGCAAAAATCCACCTCCCATAACCCGCGTTCAACGGTGGGGACGATTACCGAAATTCATGATTA
CCTGCGTTTATTGTTTGCCCGCGTGGGCGAACCGCGCTGTCCGCATCATCATGTTCCACTCACCGCGCAAACCATCAGCC
AAATGGTGGATAAAGTACTTTCCCTGCCGGAAGACAGCAAAATGATGCTGTTGGCACCGGTGGTGAAAGAACGCAAAGGC
GAACACGTTAAGCTGTTGCAACAAATTGCCGCACAAGGTTACATTCGCGCCCGTATCGATGGCGAAATTTGTGATTTATC
CGATCCACCGAAACTGGAATTACATAAAAAACACACTATTGAAGTGGTGGTGGATCGCTTTAAAGTGCGGTCGGATTTAG
CCACAAGATTGGCGGAATCCTTTGAAACCACGTTGGAATTATCGGGCGGCACGGCAGTGGTTGCCTACATGGACGATCCG
AAAGCGGAAGAGTTGGTGTTCTCCGCCAACTTTGCCTGCCCCCATTGCGGCTACTCCGTGCCGGAACTGGAACCGCGTCT
GTTTTCCTTCAATAACCCGGCAGGGGCGTGTCCGACCTGCGACGGTTTAGGCGTGCAGCAATATTTTGATGAAAAACGCG
TGGTGCAAAATCCGAACATTTCCCTTGCCAACGGCGCCATTAAAGGCTGGGATCGCCGTAATTTTTATTATTATCAAATG
CTCACTTCCCTCTCGAAACACTACCATTTCGACATAGAAACCCCGTTTGAAGCATTACCGAAAAAAATCCAACAGATTAT
TTTGAATGGTTCCGGCAAGGAAGAAATCGAGTTTCAATACATGAACGATCGCGGCGATGTGGTGCTGCGTCGCCACGCCT
TTGAAGGGATTTTGAACAACATGGCGCGCCGTTATAAAGAAACGGAATCCATGTCGGTGCGCGAAGAACTCGCCAAACAC
ATCAGCAACCGCCCGTGCGCCGATTGCGGCGGTTCCCGCTTACGCCCGGAAGCGCGCAATGTATATATTGAACAAACCAA
CCTGCCGGAGGTGTCGGAAAAAAGCATCGGTGAAGCGTTAGATTTCTTCGGCGATTTACAGCTCAGCGGGCAAAAAGCCC
AAATCGCCGAAAAAATCCTGAAAGAGATAAAAGAGCGGTTACAATTTTTAGTGAATGTAGGCTTGAATTATCTTTCCCTT
TCCCGCTCTGCCGAAACCCTTTCTGGCGGTGAAGCACAACGGATTCGCCTCGCCAGCCAAATCGGCGCAGGATTAGTGGG
TGTGATGTACGTGTTGGATGAACCCTCCATCGGCTTGCACCAACGGGACAATGAACGCCTGCTTAACACGCTGATTCATT
TGCGTAATTTAGGCAATACAGTAATCGTGGTGGAACATGACGAAGACGCCATTTTGAGCGCCGACCACATTATCGACATC
GGACCGGGCGCCGGCGTGCACGGAGGTAGCGTCATCGCCGAAGGCACCGCACAACAAATCATGCAAAATCCGAATTCCCT
CACGGGTAAATTTTTATCGGGCACGGAAAAGATCGAAATACCGAAAAAACGTACCGCACTTGATAAGAAAAAAATGCTCA
AATTGTTCGGCGCTTCCGGTAACAACCTGAAAAACGTCAATTTAGACATTCCCGTGGGCTTATTTACCTGCATCACCGGC
GTGTCCGGTTCAGGTAAATCTACACTGATTAACGACACTCTGTTCCCTATTGCACAAAACGCCTTGAATCGTGCAGAAAA
TGCCGAGGTATCGCCGTACAAGTCCATTAAAGGTTTGGAATTTTTCGATAAAGTTATTGATATTAACCAAAGCCCGATTG
GACGCACGCCACGCTCCAACCCGGCAACTTACACGGGCGTATTCACGCCGATTCGCGAACTGTTTGCCGGCGTACCGGAA
GCCCGTGCGCGCGGTTATAACCCGGGGCGTTTCAGTTTTAACGTGCGCGGCGGGCGCTGTGAAGCCTGCCAGGGCGACGG
CGTAATCAAAGTGGAAATGCACTTCCTGCCCGATGTGTACGTGCCTTGCGACCAATGTAAAGGCAAGCGTTACAATCGCG
AAACCCTGGAAATCCGCTACAAAGGTAAAACCATTCATCAGGTGCTGGACATGACGGTGGAAGATGCGCGCGAGTTTTTC
GATGCCATTCCAATGATTGCGCGTAAATTGCAAACCCTGATTGACGTGGGCTTGTCTTATATTCGCTTGGGGCAATCCTC
TACCACCCTGTCCGGCGGGGAAGCGCAACGGGTGAAACTGGCGACGGAACTCTCCAAACGGGATACGGGCAAAACCCTGT
ATATTCTGGACGAACCGACCACAGGGCTGCATTTTGCCGACATTAAACAATTGCTTTCCGTGTTACACCGTTTACGCGAT
CAAGGCAACACCATCGTGGTCATTGAGCATAATTTAGACGTGATTAAAACCGCCGACTGGATTGTAGATCTCGGCCCTGA
AGGCGGCAGCGGCGGCGGACAAATTATCGCGACCGGCACACCGGAACAGGTTGCCAAAATGGAGGGCTCGCACACCGCCC
GCTTCCTCAAAGAGATTTTGGCAAAAGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| uvrA | Streptococcus pneumoniae R6 |
57.447 |
99.682 |
0.573 |
| uvrA | Streptococcus pneumoniae TIGR4 |
57.447 |
99.682 |
0.573 |
| uvrA | Streptococcus pneumoniae D39 |
57.447 |
99.682 |
0.573 |