Detailed information NTG0537763

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: LIN97_RS02045
• Genome accession: NZ_CP085095
• Coordinates: 378210..381041 (-)
• Length: 943 a.a.
• NCBI ID: WP_233115438.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 5R
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 373210..386041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIN97_RS02020	secM	375629..375946 (-)	318	WP_005544588.1	secA translation cis-regulator SecM	-
LIN97_RS02025	-	376038..376349 (+)	312	WP_005568824.1	DciA family protein	-
LIN97_RS02030	-	376470..376880 (+)	411	WP_005589530.1	MerR family transcriptional regulator	-
LIN97_RS02035	-	376957..377763 (-)	807	WP_249849260.1	IS3 family transposase	-
LIN97_RS02040	-	377760..378132 (-)	373	Protein_399	helix-turn-helix domain-containing protein	-
LIN97_RS02045	uvrA	378210..381041 (-)	2832	WP_233115438.1	excinuclease ABC subunit UvrA	Machinery gene
LIN97_RS02050	ssb	381211..381690 (+)	480	WP_005544986.1	single-stranded DNA-binding protein	Machinery gene
LIN97_RS02055	-	381796..382650 (-)	855	WP_005544984.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	-
LIN97_RS02060	aroB	382653..383741 (-)	1089	WP_005544982.1	3-dehydroquinate synthase	-
LIN97_RS02065	aroK	383765..384292 (-)	528	WP_005555432.1	shikimate kinase AroK	-
LIN97_RS02070	comE	384506..385915 (-)	1410	WP_005566816.1	type IV pilus secretin PilQ	Machinery gene

Sequence

Protein

• Length: 943 a.a.
• Molecular weight: 104367.25 Da
• Isoelectric Point: 7.0544

>NTDB_id=537763 LIN97_RS02045 WP_233115438.1 378210..381041(-) (uvrA) [Aggregatibacter actinomycetemcomitans strain 5R]
MDTIDIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPHHHVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKERKG
EHVKLLQQIAAQGYIRARIDGEICDLSDPPKLELHKKHTIEVVVDRFKVRSDLATRLAESFETTLELSGGTAVVAYMDDP
KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPNISLANGAIKGWDRRNFYYYQM
LTSLSKHYHFDIETPFEALPKKIQQIILNGSGKEEIEFQYMNDRGDVVLRRHAFEGILNNMARRYKETESMSVREELAKH
ISNRPCADCGGSRLRPEARNVYIEQTNLPEVSEKSIGEALDFFGDLQLSGQKAQIAEKILKEIKERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAILSADHIIDI
GPGAGVHGGSVIAEGTAQQIMQNPNSLTGKFLSGTEKIEIPKKRTALDKKKMLKLFGASGNNLKNVNLDIPVGLFTCITG
VSGSGKSTLINDTLFPIAQNALNRAENAEVSPYKSIKGLEFFDKVIDINQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEDACEFF
DAIPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHRLRD
QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEQVAKMEGSHTARFLKEILAKG

Nucleotide

• Length: 2832 bp

>NTDB_id=537763 LIN97_RS02045 WP_233115438.1 378210..381041(-) (uvrA) [Aggregatibacter actinomycetemcomitans strain 5R]
ATGGATACCATCGACATTCGTGGGGCGCGAACCCACAATCTGAAAAATATTAACTTAACCATTCCACGCGACAAACTTAT
CGTTATCACCGGTTTATCCGGTTCGGGCAAGTCTTCGCTGGCGTTTGATACCCTGTATGCGGAAGGACAACGCCGTTATG
TGGAATCCCTTTCTGCCTATGCGCGCCAGTTTCTGTCATTAATGGAAAAGCCTGATGTGGACCACATTGAAGGGCTTTCA
CCGGCGATTTCCATTGAGCAAAAATCCACCTCCCATAACCCGCGTTCAACGGTGGGGACGATTACCGAAATTCATGATTA
CCTGCGTTTATTGTTTGCCCGCGTGGGCGAACCGCGCTGTCCGCATCATCATGTTCCGCTCACCGCGCAAACCATCAGCC
AAATGGTGGATAAAGTACTTTCCCTGCCGGAAGACAGCAAAATGATGCTGTTGGCACCGGTGGTGAAAGAACGCAAAGGC
GAACACGTTAAGCTGTTGCAACAAATTGCCGCACAAGGTTACATTCGCGCCCGTATCGATGGCGAAATTTGTGATTTATC
CGATCCACCGAAACTGGAATTACATAAAAAACACACTATTGAAGTGGTGGTGGATCGCTTTAAAGTGCGGTCGGATTTAG
CCACAAGATTGGCGGAATCCTTTGAAACCACGTTGGAATTATCGGGCGGCACGGCAGTGGTTGCCTACATGGACGATCCG
AAAGCGGAAGAGTTGGTGTTCTCCGCCAACTTTGCCTGCCCCCATTGCGGCTACTCCGTGCCGGAACTGGAACCGCGTCT
GTTTTCCTTCAATAACCCGGCAGGGGCGTGTCCGACCTGCGACGGTTTAGGCGTGCAGCAATATTTTGATGAAAAACGCG
TGGTGCAAAATCCGAACATTTCCCTTGCCAACGGCGCCATTAAAGGCTGGGATCGCCGTAATTTTTATTATTATCAAATG
CTCACTTCCCTCTCGAAACACTACCATTTCGACATAGAAACCCCGTTTGAAGCATTACCGAAAAAAATCCAACAGATTAT
TTTGAATGGTTCCGGCAAGGAAGAAATCGAGTTTCAATACATGAACGATCGCGGCGATGTGGTGCTGCGTCGCCACGCCT
TTGAAGGGATTTTGAACAACATGGCGCGCCGTTATAAAGAAACGGAATCCATGTCGGTGCGCGAAGAACTCGCCAAACAC
ATCAGCAACCGCCCGTGCGCCGATTGCGGCGGTTCCCGCTTACGCCCGGAAGCGCGCAATGTATATATTGAACAAACCAA
CCTGCCGGAGGTGTCGGAAAAAAGCATCGGTGAAGCGTTAGATTTCTTCGGCGATTTACAGCTCAGCGGGCAAAAAGCCC
AAATCGCCGAAAAAATCCTGAAAGAGATAAAAGAGCGGTTACAATTTTTAGTGAATGTAGGCTTGAATTATCTTTCCCTT
TCCCGCTCTGCCGAAACCCTTTCTGGCGGTGAAGCACAACGGATTCGCCTCGCCAGCCAAATCGGCGCAGGATTAGTGGG
TGTGATGTACGTGTTGGATGAACCCTCCATCGGCTTGCACCAACGGGACAATGAACGCCTGCTTAACACGCTGATTCATT
TGCGTAATTTAGGCAATACAGTAATCGTGGTGGAACATGACGAAGACGCCATTTTGAGCGCCGACCACATTATCGACATC
GGACCGGGCGCCGGCGTGCACGGAGGTAGCGTCATCGCCGAAGGCACCGCACAACAAATCATGCAAAATCCGAATTCCCT
CACGGGTAAATTTTTATCGGGCACGGAAAAGATCGAAATACCGAAAAAACGTACCGCACTTGATAAGAAAAAAATGCTCA
AATTGTTCGGCGCTTCCGGTAACAACCTGAAAAACGTCAATTTAGACATTCCCGTGGGCTTATTTACCTGCATCACCGGC
GTGTCCGGTTCAGGTAAATCTACACTGATTAACGACACTCTGTTCCCTATTGCACAAAACGCCTTGAATCGTGCAGAAAA
TGCCGAGGTATCGCCGTACAAGTCCATTAAAGGTTTGGAATTTTTCGATAAAGTTATTGATATTAACCAAAGCCCGATTG
GACGCACGCCACGCTCCAACCCGGCAACTTACACGGGCGTATTCACGCCGATTCGCGAACTGTTTGCCGGCGTACCGGAA
GCCCGTGCGCGCGGTTATAACCCGGGGCGTTTCAGTTTTAACGTGCGCGGCGGGCGCTGTGAAGCCTGCCAGGGCGACGG
CGTAATCAAAGTGGAAATGCACTTCCTGCCCGATGTGTACGTGCCTTGCGACCAATGTAAAGGCAAGCGTTACAATCGCG
AAACCCTGGAAATCCGCTACAAAGGTAAAACCATTCATCAGGTGCTGGACATGACGGTGGAAGATGCGTGCGAGTTTTTC
GATGCCATTCCAATGATTGCGCGTAAATTGCAAACCCTGATTGACGTGGGCTTGTCTTATATTCGCTTGGGGCAATCCTC
TACCACCCTGTCCGGCGGGGAAGCGCAACGGGTGAAACTGGCGACGGAACTCTCCAAACGGGATACGGGCAAAACCCTGT
ATATTCTGGACGAACCGACCACAGGGCTGCATTTTGCCGACATTAAACAATTGCTTTCCGTGTTACACCGTTTACGCGAT
CAAGGCAACACCATCGTGGTCATTGAGCATAATTTAGACGTGATTAAAACCGCCGACTGGATTGTAGATCTCGGCCCTGA
AGGCGGCAGCGGCGGCGGACAAATTATCGCGACCGGCACACCGGAACAGGTTGCCAAAATGGAGGGCTCGCACACCGCCC
GCTTCCTCAAAGAGATTTTGGCAAAAGGCTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-399)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.447	99.682	0.573
uvrA	Streptococcus pneumoniae TIGR4	57.447	99.682	0.573
uvrA	Streptococcus pneumoniae D39	57.447	99.682	0.573