Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6K59_RS03965 Genome accession   NZ_CP069992
Coordinates   833414..834010 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain FDAARGOS_1329     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 828414..839010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K59_RS03945 (I6K59_03945) - 828606..830363 (-) 1758 WP_032414743.1 AAA family ATPase -
  I6K59_RS03950 (I6K59_03950) matP 830549..831001 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  I6K59_RS03955 (I6K59_03955) ompA 831133..832203 (-) 1071 WP_002898408.1 porin OmpA -
  I6K59_RS03960 (I6K59_03960) sulA 832556..833065 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  I6K59_RS03965 (I6K59_03965) sxy/tfoX 833414..834010 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  I6K59_RS03970 (I6K59_03970) yccS 834024..836159 (-) 2136 WP_032414745.1 YccS family putative transporter -
  I6K59_RS03975 (I6K59_03975) - 836177..836623 (-) 447 WP_002898425.1 YccF domain-containing protein -
  I6K59_RS03980 (I6K59_03980) helD 836748..838802 (+) 2055 WP_032414747.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=537761 I6K59_RS03965 WP_004150836.1 833414..834010(+) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1329]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=537761 I6K59_RS03965 WP_004150836.1 833414..834010(+) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1329]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51