Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6K47_RS01830 Genome accession   NZ_CP069961
Coordinates   346839..347435 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain FDAARGOS_1317     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 341839..352435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K47_RS01815 (I6K47_01815) helD 342047..344101 (-) 2055 WP_004176653.1 DNA helicase IV -
  I6K47_RS01820 (I6K47_01820) - 344226..344672 (+) 447 WP_002898425.1 YccF domain-containing protein -
  I6K47_RS01825 (I6K47_01825) yccS 344690..346825 (+) 2136 WP_002898422.1 YccS family putative transporter -
  I6K47_RS01830 (I6K47_01830) sxy/tfoX 346839..347435 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  I6K47_RS01835 (I6K47_01835) sulA 347784..348293 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  I6K47_RS01840 (I6K47_01840) ompA 348646..349716 (+) 1071 WP_002898408.1 porin OmpA -
  I6K47_RS01845 (I6K47_01845) matP 349848..350300 (-) 453 WP_204779827.1 macrodomain Ter protein MatP -
  I6K47_RS01850 (I6K47_01850) - 350486..352243 (+) 1758 WP_020804925.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=537599 I6K47_RS01830 WP_004179217.1 346839..347435(-) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1317]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=537599 I6K47_RS01830 WP_004179217.1 346839..347435(-) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1317]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51