Detailed information NTG0537412

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LIO33_RS05065
• Genome accession: NZ_CP085088
• Coordinates: 1013507..1014781 (-)
• Length: 424 a.a.
• NCBI ID: WP_012775180.1
• Uniprot ID: A0A0H3MUX4
• Organism: Streptococcus suis strain Ssuis_MA1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1008507..1019781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO33_RS05035	-	1008619..1008765 (+)	147	WP_012027144.1	SPJ_0845 family protein	-
LIO33_RS05040	-	1008767..1009672 (+)	906	WP_012027145.1	permease	-
LIO33_RS05045	-	1009669..1010484 (+)	816	WP_012027146.1	TIGR03943 family putative permease subunit	-
LIO33_RS05050	zwf	1010563..1012050 (+)	1488	WP_012027147.1	glucose-6-phosphate dehydrogenase	-
LIO33_RS05055	-	1012250..1012924 (+)	675	WP_012027148.1	DNA alkylation repair protein	-
LIO33_RS05060	-	1012926..1013483 (+)	558	WP_012027149.1	GNAT family N-acetyltransferase	-
LIO33_RS05065	pilA	1013507..1014781 (-)	1275	WP_012775180.1	signal recognition particle-docking protein FtsY	Machinery gene
LIO33_RS05070	-	1014783..1015595 (-)	813	WP_002936036.1	Cof-type HAD-IIB family hydrolase	-
LIO33_RS05075	-	1015585..1016394 (-)	810	WP_012027151.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47099.51 Da
• Isoelectric Point: 4.4431

>NTDB_id=537412 LIO33_RS05065 WP_012775180.1 1013507..1014781(-) (pilA) [Streptococcus suis strain Ssuis_MA1]
MGLFDRLFGQKKQEEQVALVEEVEREQSASSEDTVTTEVESATQEMEKFQSEVAETELTAEQEAQKQRTLDMMAQYYAAK
EAAAARVKEAQEQGFDPAIQTKVKEEPVEEVAPVGQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
ILSDVGVQVASTLTEELRYEAKLQNAKKIDELRRVIIEKLVDIYEKDGQFSEQINFQDDLTVMLFVGVNGVGKTTSIGKL
AYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKENL
MAELEKIGRIIKRTLPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELDIPVKLIGF
GEKIDDIGEFKSEEFMRGLLEGLV

Nucleotide

• Length: 1275 bp

>NTDB_id=537412 LIO33_RS05065 WP_012775180.1 1013507..1014781(-) (pilA) [Streptococcus suis strain Ssuis_MA1]
ATGGGATTATTTGATCGATTATTTGGACAAAAAAAACAAGAGGAGCAAGTCGCTCTTGTTGAAGAAGTGGAAAGGGAGCA
GTCGGCTTCTAGCGAAGATACAGTAACTACTGAAGTTGAGTCAGCTACTCAAGAAATGGAAAAGTTCCAGTCTGAAGTAG
CAGAGACTGAATTGACAGCCGAACAAGAAGCTCAGAAACAACGGACCTTAGACATGATGGCTCAATATTATGCAGCCAAA
GAAGCCGCTGCGGCTCGAGTGAAGGAAGCGCAGGAACAAGGCTTTGACCCTGCTATTCAAACCAAGGTCAAGGAAGAGCC
TGTTGAGGAAGTTGCTCCAGTAGGGCAAGAAAGTGAACAGGACAAGTACCAGCGTACCTTGAAAAAGACGCGTACAGGAT
TTGGGGCAAGGCTCAATGAATTCTTTGCCAATTTCCGTTCGGTTGATGAAGAATTTTTCGAAGAGTTGGAAGAAATGCTG
ATTTTGTCAGACGTAGGTGTGCAAGTTGCTTCTACGCTGACAGAGGAGCTCCGCTATGAAGCCAAGCTACAAAATGCCAA
GAAGATAGATGAACTCCGTCGTGTTATCATCGAAAAATTGGTGGATATTTACGAAAAAGACGGTCAATTCAGTGAGCAAA
TCAATTTCCAAGATGATTTGACAGTCATGCTCTTTGTCGGTGTCAACGGTGTTGGGAAGACGACGTCTATCGGTAAGTTA
GCCTACAAGTACAAGCAAGCTGGCAAGAAGGTCATGTTGGTCGCAGCGGACACCTTCCGTGCGGGTGCGGTAGCCCAGCT
GGTCGAGTGGGGTCGCCGTGTCGATGTGCCAGTAGTCACAGGACCTGAAAAGTCAGACCCAGCTAGTGTGGTTTTTGATG
GGGTAAAACGTGCCGTGGCAGAAGGCGTGGATATTCTCATGATTGATACAGCAGGTCGCTTGCAAAATAAAGAAAACCTC
ATGGCAGAGCTGGAAAAAATCGGTCGCATCATCAAACGGACCCTACCTGATGCACCGCATGAAACCCTCTTAGCACTGGA
TGCCTCCACAGGTCAAAACGCCCTCAGTCAAGCCAAGGAATTTGCAAAAATTACTCCATTGACTGGGCTAGTCTTGACCA
AGCTAGACGGTACAGCCAAGGGTGGTGTCGTTCTTGCCATCCGTCAGGAACTGGATATACCAGTTAAGCTAATTGGTTTC
GGTGAGAAAATCGATGACATCGGTGAATTCAAATCCGAAGAATTCATGCGTGGGCTATTGGAAGGATTGGTATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (221-420)

• SRP54-type protein, helical bundle domain (SRP54_N) (134-200)

3D structure

• AlphaFold DB: A0A0H3MUX4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	36.322	100	0.373