Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LIO32_RS07765 Genome accession   NZ_CP085087
Coordinates   1565052..1565828 (-) Length   258 a.a.
NCBI ID   WP_012774987.1    Uniprot ID   A0A0H3N2A2
Organism   Streptococcus suis strain Ssuis_MA2     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1560052..1570828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIO32_RS07740 - 1560407..1562179 (-) 1773 WP_172046087.1 beta-galactosidase family protein -
  LIO32_RS07745 - 1562386..1563096 (+) 711 WP_004194099.1 GntR family transcriptional regulator -
  LIO32_RS07750 - 1563236..1563967 (-) 732 WP_012774988.1 GntR family transcriptional regulator -
  LIO32_RS07755 - 1564067..1564384 (-) 318 WP_004194104.1 DUF960 domain-containing protein -
  LIO32_RS07760 - 1564442..1564975 (-) 534 WP_004194106.1 DUF402 domain-containing protein -
  LIO32_RS07765 recX 1565052..1565828 (-) 777 WP_012774987.1 recombination regulator RecX Regulator
  LIO32_RS07770 rlmD 1565866..1567218 (+) 1353 WP_012775501.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  LIO32_RS07775 - 1567503..1567706 (+) 204 Protein_1502 transposase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30372.90 Da        Isoelectric Point: 9.3979

>NTDB_id=537330 LIO32_RS07765 WP_012774987.1 1565052..1565828(-) (recX) [Streptococcus suis strain Ssuis_MA2]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSNYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKTLIDKRLAEEDFSELAGKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYEAAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=537330 LIO32_RS07765 WP_012774987.1 1565052..1565828(-) (recX) [Streptococcus suis strain Ssuis_MA2]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTAATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATTGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTTCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAAACGCTGATTGATAAAAGACTGGCTGAGGAAGATTTTTCAGAGCTTGCTGGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGTTT
TTCTTATGAGGCGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGATTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTATGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3N2A2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.206

100

0.364