Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   I6K87_RS04655 Genome accession   NZ_CP069892
Coordinates   949622..951424 (-) Length   600 a.a.
NCBI ID   WP_204982821.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 944622..956424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS04640 (I6K87_04640) - 947185..947754 (-) 570 WP_204982819.1 LURP-one-related/scramblase family protein -
  I6K87_RS04645 (I6K87_04645) prsA 947892..948830 (-) 939 WP_049533609.1 peptidylprolyl isomerase PrsA -
  I6K87_RS04650 (I6K87_04650) - 948937..949620 (-) 684 WP_204982820.1 O-methyltransferase -
  I6K87_RS04655 (I6K87_04655) pepF 949622..951424 (-) 1803 WP_204982821.1 oligoendopeptidase F Regulator
  I6K87_RS04660 (I6K87_04660) coiA 951376..952401 (-) 1026 WP_049533611.1 competence protein CoiA Machinery gene
  I6K87_RS04665 (I6K87_04665) celB 952490..952786 (-) 297 Protein_913 PTS cellobiose transporter subunit IIC -
  I6K87_RS04670 (I6K87_04670) - 952780..953766 (-) 987 Protein_914 6-phospho-beta-glucosidase -
  I6K87_RS04675 (I6K87_04675) - 954061..955230 (-) 1170 WP_204982823.1 MFS transporter -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69178.11 Da        Isoelectric Point: 4.5579

>NTDB_id=537244 I6K87_RS04655 WP_204982821.1 949622..951424(-) (pepF) [Streptococcus anginosus strain FDAARGOS_1357]
MAKQRNEIEEKYTWDLTTIFPTDEAFEAELSQVSKELKGASSLAGHLLDSADSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQAFAFYEPEFMAITDEQYQTFLTEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
SEIFSAAGDTFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALT
KAEEVLAILGEDYLSRVKEAFSDRWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTREN
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYAGLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNATFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=537244 I6K87_RS04655 WP_204982821.1 949622..951424(-) (pepF) [Streptococcus anginosus strain FDAARGOS_1357]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCCCAACAGATGAAGCTTTTGA
GGCAGAGTTAAGTCAAGTTTCAAAAGAATTAAAAGGAGCCAGCAGCTTAGCAGGTCATCTTTTGGATTCGGCTGATAGCC
TTTTAAAAACAACAGAAATCCAATTGGACTTAATGCGTCGCATAGAAAAGCTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGCGTGGCAAAATACCAAGAATACCAAGCCAAGGGTATGGCTATTTATAGTGAATTCGGACAGGCCTTTGC
TTTCTATGAACCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAACTGAAAAGCCTGAATTGCAAATCT
ATCAGCACTTCTTTGATAAGCTACTGCAAAAGAAACCTCATATCCTTTCTCAGCGTGAGGAAGAATTGTTGGCAGGTGCT
AGTGAAATTTTTAGTGCTGCGGGTGATACTTTTGGAATCTTGGACAATGCCGATATTGTCTTTCCAACCGTACACGACGA
AGAAGGAAATGAAGTACAATTGACGCACGGAAATTACATCAGTCTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAG
CTTATGAAGCGCTTTACAGCGTCTATGAGCAATACCAACACACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTCAACAAACATTTGCCACTCTTACATCGCTATATTGCGCTACGTGCAAAGATTTTAGGTC
TTTCTGATTTGAAAATGTACGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACTTATGAGGAAGCCTTGACG
AAAGCAGAAGAAGTCTTAGCTATCCTTGGAGAAGATTATCTAAGTCGAGTAAAAGAAGCCTTTTCAGATCGTTGGATTGA
TGTTTATGAAAACCAAGGCAAGCGCTCTGGGGCTTATTCTGGTGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTTACGCTGGTTCATGAAACTGGTCACAGCATGCATTCCAGCTACACTCGTGAAAAT
CAGCCGTACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTTACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTGGACGGTTTCCGTGGAACTGTTT
TCCGCCAAACTCAGTTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGGTTTGAATGAAAAGTATTATGGTTTGACGAAAGAGGACAACCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTACTATGTTTTCCAATACTCAACCGGTTTCTCAGCTGCTTCTGCCTTAGCTG
ATAAGATTGTTAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTA
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTATCTCAATGCTACCTTTGCAGTCTTTGAGCGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGATTGGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-580)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.624

99.333

0.682