Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6K87_RS04125 Genome accession   NZ_CP069892
Coordinates   828485..829288 (-) Length   267 a.a.
NCBI ID   WP_003027672.1    Uniprot ID   A0AAI9NI03
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   require for competence development (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IS/Tn 827649..828407 828485..829288 flank 78


Gene organization within MGE regions


Location: 827649..829288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS04125 (I6K87_04125) vicX 828485..829288 (-) 804 WP_003027672.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29868.85 Da        Isoelectric Point: 6.0342

>NTDB_id=537237 I6K87_RS04125 WP_003027672.1 828485..829288(-) (vicX) [Streptococcus anginosus strain FDAARGOS_1357]
MSEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMINQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=537237 I6K87_RS04125 WP_003027672.1 828485..829288(-) (vicX) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCGTCAGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAAGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAAATTGACCGTAAACCAGAGGATT
TGGATGCCATTTTGGTAACGCATGAGCATAAGGATCATATCCATGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTTAGTCAGAAGCACATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGTGTTAGTCATGATGCGGTTGCACCGCAATTTT
ACCGACTGATGAAAGACGATAAAAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCGGGGATTATT
GAAAATGCGGACGGGTATTTGATCGAGTCCAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGCCTGAA
GCAGCGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGGCATCTTAGCAAAGAAAATAATACCAAAGAATTGGCTCATATCACAATGATCAATCAATTA
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816