Detailed information NTG0537211

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: LIO31_RS05140
• Genome accession: NZ_CP085086
• Coordinates: 1010766..1011836 (+)
• Length: 356 a.a.
• NCBI ID: WP_024405698.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1005766..1016836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO31_RS05110	-	1006481..1006813 (+)	333	WP_002935001.1	putative DNA-binding protein	-
LIO31_RS05115	ffh	1006826..1008400 (+)	1575	WP_024405702.1	signal recognition particle protein	-
LIO31_RS05120	-	1008594..1009262 (+)	669	WP_074389422.1	SatD family protein	-
LIO31_RS05125	-	1009266..1010006 (+)	741	WP_074389423.1	DUF3307 domain-containing protein	-
LIO31_RS05130	-	1010073..1010366 (+)	294	WP_226319149.1	adenylyl-sulfate kinase	-
LIO31_RS05135	-	1010363..1010599 (+)	237	WP_226319150.1	hypothetical protein	-
LIO31_RS05140	xerS	1010766..1011836 (+)	1071	WP_024405698.1	tyrosine recombinase XerS	Machinery gene
LIO31_RS05145	-	1011906..1013414 (-)	1509	WP_024405697.1	phosphoglucomutase	-
LIO31_RS05150	-	1013489..1014430 (-)	942	WP_024405696.1	sensor histidine kinase	-
LIO31_RS05155	braR	1014427..1015092 (-)	666	WP_024405695.1	response regulator transcription factor	Regulator
LIO31_RS05160	-	1015134..1015400 (-)	267	WP_024405694.1	type II toxin-antitoxin system RelE/ParE family toxin	-
LIO31_RS05165	relB	1015384..1015635 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41586.85 Da
• Isoelectric Point: 9.4657

>NTDB_id=537211 LIO31_RS05140 WP_024405698.1 1010766..1011836(+) (xerS) [Streptococcus suis strain Ssuis_MA6]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHVTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVKLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLKMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMNIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=537211 LIO31_RS05140 WP_024405698.1 1010766..1011836(+) (xerS) [Streptococcus suis strain Ssuis_MA6]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACAACCTTGTACGAATATCTAAAGGAATACCGTAGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATGTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACTATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGGGAGCCCTACTTCT
ACCGCAATGTCATGAAGAAGGTATCCACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAATATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAATTCTTGGACTATGTCGATAAAGAATACCAGGTAAAGTTATCCAAACGTGCCCT
CTCATCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCACTTCTCTTGGCGTCTGGCGTTCGTCTGTCTGAGG
CGGTCAATCTGGACCTCCGTGATGTCAACCTCAAGATGATGATCATCGAGGTGACCCGTAAAGGTGGCAAGCGGGACTCG
GTCAATGTGGCAGGATTTGCTAAGCCTTACCTAGAAGCCTACATGAATATCCGGCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGACGCTTCTTCCATTGAGAAAATGGTGGCTA
AGTACTCTGCGGACTTCAAGATACGCGTAACTCCCCACAAACTCCGTCATACCTTGGCAACTCGGCTCTACGACGCCACT
AAGTCACAAGTTCTGGTCAGTCACCAACTGGGTCATGCCAATACCCAAGTCACAGACCTCTATACCCATATCGTCAACGA
TGAGCAAAAAAATGCTCTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831