Detailed information NTG0537206

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: LIO31_RS04615
• Genome accession: NZ_CP085086
• Coordinates: 907284..910550 (+)
• Length: 1088 a.a.
• NCBI ID: WP_074412208.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 902284..915550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO31_RS04605	-	903082..903246 (+)	165	WP_012775058.1	hypothetical protein	-
LIO31_RS04610	-	903610..906993 (+)	3384	WP_074389867.1	MucBP domain-containing protein	-
LIO31_RS04615	rexB	907284..910550 (+)	3267	WP_074412208.1	ATP-dependent nuclease subunit B	Machinery gene
LIO31_RS04620	rexA	910550..914200 (+)	3651	WP_171840759.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
LIO31_RS04625	plsY	914322..914966 (-)	645	WP_012775062.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124647.97 Da
• Isoelectric Point: 5.1302

>NTDB_id=537206 LIO31_RS04615 WP_074412208.1 907284..910550(+) (rexB) [Streptococcus suis strain Ssuis_MA6]
MKLVYTDIRNPLTQYLTDTSAEFAKEGKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLLTDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
EGFEHQSKLAQLTRLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQATYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLFNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRAFVANSRADYDVVTVKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGPQSGTALLEKFMA
FLEAIELPKNMEKMSRNLSEVEQEKEEQVWKSFTHILENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSLQDIGHYKSLLSRLIESERPSLDNEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGEITSKQLSDETLAALFPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNYFYQTRNQLYTEDEFAVLLNHNQELYKQAAKDILDGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=537206 LIO31_RS04615 WP_074412208.1 907284..910550(+) (rexB) [Streptococcus suis strain Ssuis_MA6]
ATGAAATTAGTCTATACAGATATTCGGAATCCTCTGACACAGTATTTAACGGATACCTCGGCAGAATTTGCTAAGGAAGG
TAAGCGAGTTTTTTATATTGCTCCAAACTCTCTATCCTTTGAGATGGAACGCAAGGTCTTGGAATACCTGCCTGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTAGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCCATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGCCG
TTTGCTGACAGATTTTGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACCTGGAAGCCATGGACTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAGGCTTTGAGCATCAGTCTAAGTTAGCACAGTTGACTCGCTTGGTAGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGTTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTGATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGCCACCTATGCGGAAGGCAACGTCTATCAAGCCAAC
GTTGACTTTTTACGTCAGCTATCAGCGCAGTTCCAGACTAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGATAGTAT
CGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGATCAAGAAA
AAATCCAACTCTGGGAAGTTGTTAACCAAAAAGAAGAGGTGGAGCAGGTTGCGACTGCAATTCGTCAGCATGTGCATCAA
GGGGCTCGCTATAAAGACATCTTGTTGCTCTTGGGGGATGTGGATAGCTACAAGTTGCAGATTGGCAAGATTTTTGACAA
GTATGACATTCCTTACTATTTCGGCAAGGCAGAGGAGATGAGTCATCATCCGTTGGTCCATTTTGTGGAGTCCTTGGAGC
GCTTGCGTCGCTATCGTTTTCGTGCGGAAGACCTGTTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACCTATTTGAGTCTTACATCCTCTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTGTGGCCAA
TAGCAGAGCTGACTATGATGTTGTGACTGTCAAGGAGAAGCGACTTGTCTATGATTTGAATGTCTTGGAACCCCTACGTG
CTAAGATTATGGAACCTTTGAACCAGCTGTTTAAGGCTGGACCACAATCTGGAACTGCCTTGCTTGAGAAATTTATGGCA
TTTTTGGAGGCGATTGAGCTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGCGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATATTCTTGAGAATTTTCATCAGATTTTCGGAAAAGAAAAATTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGAATGCAGGCCAGTCACTATCGTACCGTTCCTGCAACAGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCGCACACTGCAAAGTATGTTTATGCTATCGGAATGGGCCAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACAGAAGAAGAGATGGAAAAAGTCAATCTTGTTTCGGCTAGTTCTTCACGTTTTGATTTGG
TCAGTCGAGAGAATATCAAGAAGAACCATGCTGCCATGATGTCTCTGCTTAATGCTGCGACGGAACAGTTAGTTATTTCT
ACTCCTCAGATTTATAACGAAGGTGAGGATAGTCTCTCCCCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAATCCGA
AGAACGGGGACGGATTAAAACACTTAGTCTGCAAGACATCGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCAG
AAAGACCATCTCTTGATAATGAAGAATGGGAAGGGCAGAGGGCCTTCTGGACAGTTTTGGTTCGCCATTTGAAGAAGAAA
TTGGAATCGCAAGGCATTGAAATTCCGACCATTACTGGCGAAATTACTTCTAAACAACTTTCAGATGAAACCTTGGCTGC
TTTATTTCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TACGCAATGTACTTCGCTTGCGGGAACAGGAATCCATCCATCCGACGGCCTTTCAACACGGGCTCTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAACTAGATTTTGATCAAAAAGTGGACAAGGCCATCCTGCGTACACGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAAGATGCGGATGCTCGTTATACGGAGGAGGTGCTGGATAAGATTGCTCGCTCCA
GTGCGACCATTTTGCGGGATAATGATTTGGTTGAAATTGATGGCCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTGGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACCATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
CGGTGTCGTGGATTATAAGTCCAGCGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTCAAACCTCAGTTGGTAA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGGGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACTAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATTATTTTTATCAGACTCGTAACCAACTCTATACGGAAGATGAGTTTGCGG
TGTTATTGAACCACAACCAAGAACTCTACAAACAAGCTGCCAAGGACATCCTGGATGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
ACGGCGGTTGGTCAAAGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1042)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	44.696	100	0.453