Detailed information NTG0537128

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LIO34_RS06540
• Genome accession: NZ_CP085085
• Coordinates: 1288345..1289619 (-)
• Length: 424 a.a.
• NCBI ID: WP_002936035.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1283345..1294619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO34_RS06510	-	1283516..1283662 (+)	147	WP_002936026.1	SPJ_0845 family protein	-
LIO34_RS06515	-	1283664..1284569 (+)	906	WP_002936027.1	permease	-
LIO34_RS06520	-	1284566..1285381 (+)	816	WP_002936028.1	TIGR03943 family putative permease subunit	-
LIO34_RS06525	zwf	1285460..1286947 (+)	1488	WP_002936030.1	glucose-6-phosphate dehydrogenase	-
LIO34_RS06530	-	1287088..1287762 (+)	675	WP_009910038.1	DNA alkylation repair protein	-
LIO34_RS06535	-	1287764..1288321 (+)	558	WP_002936034.1	GNAT family N-acetyltransferase	-
LIO34_RS06540	pilA	1288345..1289619 (-)	1275	WP_002936035.1	signal recognition particle-docking protein FtsY	Machinery gene
LIO34_RS06545	-	1289621..1290433 (-)	813	WP_002936036.1	Cof-type HAD-IIB family hydrolase	-
LIO34_RS06550	-	1290423..1291232 (-)	810	WP_002936037.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47115.52 Da
• Isoelectric Point: 4.4713

>NTDB_id=537128 LIO34_RS06540 WP_002936035.1 1288345..1289619(-) (pilA) [Streptococcus suis strain Ssuis_MA8]
MGLFDRLFGQKKQEEQVALVEEVEREQSASSEDTVTTEVESATQEMEKFQSEVAETELTAEQEAQKQRTLDMMAQYYAAK
EAAAARVKEAQEQGFDPAIQTKVKEEPVEEVAPVGQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
ILSDVGVQVASTLTEELRYEAKLQNAKKTDELRRVIIEKLVDIYEKDGQFSERINFQDDLTVMLFVGVNGVGKTTSIGKL
AYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKENL
MAELEKIGRIIKRTLPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELDIPVKLIGF
GEKIDDIGEFKSEEFMRGLLEGLV

Nucleotide

• Length: 1275 bp

>NTDB_id=537128 LIO34_RS06540 WP_002936035.1 1288345..1289619(-) (pilA) [Streptococcus suis strain Ssuis_MA8]
ATGGGATTATTTGATCGATTATTTGGACAAAAAAAACAAGAGGAGCAAGTCGCTCTTGTTGAAGAAGTGGAAAGGGAGCA
GTCGGCTTCTAGCGAAGATACAGTAACTACTGAAGTTGAGTCAGCTACTCAAGAAATGGAAAAGTTCCAGTCTGAAGTAG
CAGAGACTGAATTGACAGCCGAACAAGAAGCTCAGAAACAACGGACCTTAGACATGATGGCTCAATATTATGCAGCCAAA
GAAGCCGCTGCGGCTCGAGTGAAGGAAGCGCAGGAACAAGGCTTTGACCCTGCTATTCAAACCAAGGTCAAGGAAGAGCC
TGTTGAGGAAGTTGCTCCAGTAGGGCAAGAAAGTGAACAGGACAAGTACCAGCGAACCTTGAAAAAAACTCGTACAGGAT
TTGGGGCAAGGCTCAATGAATTCTTTGCCAATTTCCGTTCGGTTGATGAAGAATTTTTCGAAGAGTTGGAAGAAATGCTG
ATTTTATCAGACGTAGGTGTGCAAGTTGCTTCTACGCTGACAGAGGAGCTCCGCTATGAAGCCAAGCTACAAAATGCCAA
GAAGACAGATGAACTCCGTCGGGTTATCATCGAAAAATTGGTGGATATTTACGAAAAAGATGGTCAATTCAGCGAGCGAA
TCAATTTCCAAGATGATTTGACAGTCATGCTCTTTGTCGGTGTCAACGGTGTTGGGAAGACGACGTCTATCGGTAAGTTA
GCCTACAAGTACAAGCAAGCTGGCAAGAAGGTCATGTTGGTCGCAGCGGACACCTTCCGTGCGGGTGCGGTAGCCCAGCT
GGTCGAGTGGGGTCGCCGTGTCGATGTGCCAGTAGTCACAGGACCTGAAAAGTCAGACCCAGCTAGTGTGGTTTTTGATG
GGGTAAAACGTGCCGTGGCAGAAGGCGTGGACATTCTCATGATTGACACAGCAGGTCGCTTGCAAAATAAAGAAAACCTC
ATGGCAGAGCTGGAAAAAATCGGTCGCATCATCAAACGAACCCTACCTGATGCACCGCATGAAACCCTCTTAGCACTAGA
TGCCTCCACAGGTCAAAACGCCCTCAGTCAAGCCAAGGAATTTGCAAAAATTACTCCATTGACTGGGCTAGTCTTGACTA
AGCTAGACGGTACAGCAAAAGGTGGTGTTGTCCTTGCCATCCGTCAGGAACTGGATATTCCAGTCAAGCTGATTGGTTTC
GGTGAAAAAATTGATGACATAGGTGAATTCAAATCCGAAGAATTCATGCGTGGGCTTTTGGAAGGATTGGTATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (134-200)

• SRP54-type protein, GTPase domain (SRP54) (221-420)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	36.322	100	0.373