Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6K35_RS09660 Genome accession   NZ_CP069847
Coordinates   1505535..1506131 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain FDAARGOS_1305     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1500535..1511131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K35_RS09645 (I6K35_09645) helD 1500743..1502797 (-) 2055 WP_004179218.1 DNA helicase IV -
  I6K35_RS09650 (I6K35_09650) - 1502922..1503368 (+) 447 WP_002898425.1 YccF domain-containing protein -
  I6K35_RS09655 (I6K35_09655) yccS 1503386..1505521 (+) 2136 WP_021465041.1 YccS family putative transporter -
  I6K35_RS09660 (I6K35_09660) sxy/tfoX 1505535..1506131 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  I6K35_RS09665 (I6K35_09665) sulA 1506480..1506989 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  I6K35_RS09670 (I6K35_09670) ompA 1507342..1508412 (+) 1071 WP_204752615.1 porin OmpA -
  I6K35_RS09675 (I6K35_09675) matP 1508544..1508996 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  I6K35_RS09680 (I6K35_09680) - 1509182..1510939 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=537018 I6K35_RS09660 WP_004179217.1 1505535..1506131(-) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1305]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=537018 I6K35_RS09660 WP_004179217.1 1505535..1506131(-) (sxy/tfoX) [Klebsiella pneumoniae strain FDAARGOS_1305]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51