Detailed information NTG0536955

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LH372_RS22600
• Genome accession: NZ_CP085074
• Coordinates: 4682999..4684024 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain P21_SE1_04.20
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4677999..4689024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LH372_RS22580 (LH372_22580)	metJ	4679060..4679377 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LH372_RS22585 (LH372_22585)	yiiX	4679561..4680169 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
LH372_RS22590 (LH372_22590)	rpmE	4680230..4680442 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LH372_RS22595 (LH372_22595)	priA	4680645..4682843 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
LH372_RS22600 (LH372_22600)	cytR	4682999..4684024 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LH372_RS22605 (LH372_22605)	ftsN	4684116..4685075 (+)	960	WP_000068828.1	cell division protein FtsN	-
LH372_RS22610 (LH372_22610)	hslV	4685168..4685698 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LH372_RS22615 (LH372_22615)	hslU	4685708..4687039 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LH372_RS22620 (LH372_22620)	menA	4687106..4688032 (+)	927	WP_226907382.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LH372_RS22625 (LH372_22625)	rraA	4688125..4688610 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LH372_RS22630 (LH372_22630)	zapB	4688695..4688940 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=536955 LH372_RS22600 WP_000644904.1 4682999..4684024(+) (cytR) [Escherichia coli strain P21_SE1_04.20]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=536955 LH372_RS22600 WP_000644904.1 4682999..4684024(+) (cytR) [Escherichia coli strain P21_SE1_04.20]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628