Detailed information NTG0536885

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LH372_RS01040
• Genome accession: NZ_CP085074
• Coordinates: 222779..223762 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain P21_SE1_04.20
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 217779..228762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LH372_RS01025 (LH372_01025)	dppA	218922..220529 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
LH372_RS01030 (LH372_01030)	dppB	220837..221856 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LH372_RS01035 (LH372_01035)	dppC	221866..222768 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LH372_RS01040 (LH372_01040)	amiE	222779..223762 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LH372_RS01045 (LH372_01045)	amiE	223759..224763 (+)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
LH372_RS01050 (LH372_01050)	yhjV	224793..226064 (-)	1272	WP_226907384.1	amino acid permease	-
LH372_RS01055 (LH372_01055)	ldrD	226540..226647 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LH372_RS01060 (LH372_01060)	bcsG	226734..228413 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
LH372_RS01065 (LH372_01065)	bcsF	228410..228601 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=536885 LH372_RS01040 WP_001196486.1 222779..223762(+) (amiE) [Escherichia coli strain P21_SE1_04.20]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=536885 LH372_RS01040 WP_001196486.1 222779..223762(+) (amiE) [Escherichia coli strain P21_SE1_04.20]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404