Detailed information NTG0536755

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LH370_RS14810
• Genome accession: NZ_CP085063
• Coordinates: 3063558..3064583 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain P31_YH1_02.21
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3058558..3069583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LH370_RS14800 (LH370_14800)	rpmE	3060789..3061001 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LH370_RS14805 (LH370_14805)	priA	3061204..3063402 (+)	2199	WP_057950787.1	primosomal protein N'	Machinery gene
LH370_RS14810 (LH370_14810)	cytR	3063558..3064583 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LH370_RS14815 (LH370_14815)	ftsN	3064675..3065634 (+)	960	WP_000068834.1	cell division protein FtsN	-
LH370_RS14820 (LH370_14820)	hslV	3065727..3066257 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LH370_RS14825 (LH370_14825)	hslU	3066267..3067598 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
LH370_RS14830 (LH370_14830)	menA	3067665..3068591 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LH370_RS14835 (LH370_14835)	rraA	3068684..3069169 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LH370_RS14840 (LH370_14840)	zapB	3069254..3069499 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=536755 LH370_RS14810 WP_000644904.1 3063558..3064583(+) (cytR) [Escherichia coli strain P31_YH1_02.21]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=536755 LH370_RS14810 WP_000644904.1 3063558..3064583(+) (cytR) [Escherichia coli strain P31_YH1_02.21]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628