Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JR441_RS07785 Genome accession   NZ_CP069789
Coordinates   1483073..1483648 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain BIM B-569G     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1478073..1488648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS07755 (JR441_07755) dapD 1478263..1478973 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JR441_RS07760 (JR441_07760) dapI 1479043..1480167 (+) 1125 WP_048655217.1 N-acetyldiaminopimelate deacetylase -
  JR441_RS07765 (JR441_07765) ykuS 1480229..1480474 (+) 246 WP_003232382.1 YkuS family protein -
  JR441_RS07770 (JR441_07770) mscT 1480511..1481314 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  JR441_RS07775 (JR441_07775) ahpA 1481549..1482091 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  JR441_RS07780 (JR441_07780) ykuV 1482161..1482607 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  JR441_RS07785 (JR441_07785) rok 1483073..1483648 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  JR441_RS07790 (JR441_07790) cse15 1483689..1484654 (-) 966 WP_029727015.1 spore protein Cse15 -
  JR441_RS07795 (JR441_07795) mobA 1484791..1485390 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  JR441_RS07800 (JR441_07800) moeB 1485441..1486460 (+) 1020 WP_198878750.1 molybdopterin-synthase adenylyltransferase MoeB -
  JR441_RS07805 (JR441_07805) glp 1486478..1487770 (+) 1293 WP_198878751.1 gephyrin-like molybdotransferase Glp -
  JR441_RS07810 (JR441_07810) mobB 1487731..1488252 (+) 522 WP_088325787.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=536605 JR441_RS07785 WP_003232378.1 1483073..1483648(+) (rok) [Bacillus subtilis strain BIM B-569G]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=536605 JR441_RS07785 WP_003232378.1 1483073..1483648(+) (rok) [Bacillus subtilis strain BIM B-569G]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1