Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   JR441_RS06055 Genome accession   NZ_CP069789
Coordinates   1180473..1181594 (+) Length   373 a.a.
NCBI ID   WP_249385609.1    Uniprot ID   -
Organism   Bacillus subtilis strain BIM B-569G     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1175473..1186594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS06020 (JR441_06020) yjbB 1176115..1177332 (+) 1218 WP_088467689.1 MFS transporter -
  JR441_RS06025 (JR441_06025) yjbC 1177496..1178074 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  JR441_RS06030 (JR441_06030) spx 1178255..1178650 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  JR441_RS06035 (JR441_06035) yjbE 1178693..1179349 (-) 657 WP_003232944.1 TerC family protein -
  JR441_RS06040 (JR441_06040) - 1179519..1179659 (+) 141 WP_119122854.1 hypothetical protein -
  JR441_RS06045 (JR441_06045) mecA 1179626..1180282 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  JR441_RS06050 (JR441_06050) - 1180277..1180399 (-) 123 WP_122060507.1 hypothetical protein -
  JR441_RS06055 (JR441_06055) coiA 1180473..1181594 (+) 1122 WP_249385609.1 competence protein CoiA Machinery gene
  JR441_RS06060 (JR441_06060) pepF 1181824..1183653 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  JR441_RS06065 (JR441_06065) - 1183691..1183858 (-) 168 WP_003244944.1 hypothetical protein -
  JR441_RS06070 (JR441_06070) spxH 1184172..1185071 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  JR441_RS06075 (JR441_06075) bhbI 1185068..1185466 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  JR441_RS06080 (JR441_06080) cwlQ 1185721..1186455 (-) 735 WP_249678509.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43801.72 Da        Isoelectric Point: 10.0036

>NTDB_id=536600 JR441_RS06055 WP_249385609.1 1180473..1181594(+) (coiA) [Bacillus subtilis strain BIM B-569G]
MFHLLGAQQNQKLKQRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCANIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RQMFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=536600 JR441_RS06055 WP_249385609.1 1180473..1181594(+) (coiA) [Bacillus subtilis strain BIM B-569G]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCAGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAATCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CAATATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGTGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCTAAGGAAACAAATCGCCTT
AGGCAGATGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.587

100

0.976