Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JR441_RS05935 Genome accession   NZ_CP069789
Coordinates   1158155..1158346 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain BIM B-569G     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1153155..1163346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS05905 (JR441_05905) argF 1154020..1154979 (+) 960 WP_198878861.1 ornithine carbamoyltransferase -
  JR441_RS05910 (JR441_05910) yjzC 1155064..1155243 (+) 180 WP_003245356.1 YjzC family protein -
  JR441_RS05915 (JR441_05915) yjzD 1155290..1155475 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  JR441_RS05920 (JR441_05920) - 1155724..1156458 (+) 735 WP_198878862.1 hypothetical protein -
  JR441_RS05925 (JR441_05925) - 1156540..1157097 (+) 558 WP_038428783.1 hypothetical protein -
  JR441_RS05930 (JR441_05930) med 1157187..1158140 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  JR441_RS05935 (JR441_05935) comZ 1158155..1158346 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  JR441_RS05940 (JR441_05940) yjzB 1158376..1158615 (-) 240 WP_003232972.1 spore coat protein YjzB -
  JR441_RS05945 (JR441_05945) fabH 1158780..1159718 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  JR441_RS05950 (JR441_05950) fabF 1159741..1160982 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  JR441_RS05955 (JR441_05955) yjaZ 1161059..1161844 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  JR441_RS05960 (JR441_05960) appD 1162036..1163022 (+) 987 WP_198878863.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=536596 JR441_RS05935 WP_003224559.1 1158155..1158346(+) (comZ) [Bacillus subtilis strain BIM B-569G]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=536596 JR441_RS05935 WP_003224559.1 1158155..1158346(+) (comZ) [Bacillus subtilis strain BIM B-569G]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1