Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JR441_RS04410 Genome accession   NZ_CP069789
Coordinates   876220..877014 (+) Length   264 a.a.
NCBI ID   WP_038428646.1    Uniprot ID   -
Organism   Bacillus subtilis strain BIM B-569G     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 871220..882014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS04380 (JR441_04380) sxzA 872058..873089 (+) 1032 WP_015715532.1 iron ABC transporter permease -
  JR441_RS04385 (JR441_04385) yfhB 873205..874086 (+) 882 WP_015715533.1 PhzF family phenazine biosynthesis isomerase -
  JR441_RS04390 (JR441_04390) yfhC 874174..874758 (+) 585 WP_003243940.1 nitroreductase -
  JR441_RS04395 (JR441_04395) yfhD 874797..874988 (-) 192 WP_003233561.1 YfhD family protein -
  JR441_RS04400 (JR441_04400) yfhE 875055..875165 (-) 111 WP_003223230.1 YfhE family protein -
  JR441_RS04405 (JR441_04405) yfhF 875220..876131 (-) 912 WP_198878901.1 TIGR01777 family oxidoreductase -
  JR441_RS04410 (JR441_04410) recX 876220..877014 (+) 795 WP_038428646.1 recombination regulator RecX Regulator
  JR441_RS04415 (JR441_04415) yfhH 877016..877330 (+) 315 WP_038428648.1 YfhH family protein -
  JR441_RS04420 (JR441_04420) yfhI 877474..878667 (+) 1194 WP_003243500.1 MFS transporter -
  JR441_RS04425 (JR441_04425) sspK 878699..878851 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  JR441_RS04430 (JR441_04430) yfhJ 878976..879245 (+) 270 WP_003243789.1 YfhJ family protein -
  JR441_RS04435 (JR441_04435) yfhK 879390..879908 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  JR441_RS04440 (JR441_04440) spdL 879993..880310 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  JR441_RS04445 (JR441_04445) ephM 880312..881172 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.23 Da        Isoelectric Point: 6.6686

>NTDB_id=536587 JR441_RS04410 WP_038428646.1 876220..877014(+) (recX) [Bacillus subtilis strain BIM B-569G]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=536587 JR441_RS04410 WP_038428646.1 876220..877014(+) (recX) [Bacillus subtilis strain BIM B-569G]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTTAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996