Detailed information NTG0536553

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LHK10_RS01010
• Genome accession: NZ_CP085056
• Coordinates: 211991..212974 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain P24_WM1_05.20
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 206991..217974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LHK10_RS00995 (LHK10_00995)	dppA	208134..209741 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
LHK10_RS01000 (LHK10_01000)	dppB	210049..211068 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LHK10_RS01005 (LHK10_01005)	dppC	211078..211980 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LHK10_RS01010 (LHK10_01010)	amiE	211991..212974 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LHK10_RS01015 (LHK10_01015)	dppF	212971..213975 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LHK10_RS01020 (LHK10_01020)	yhjV	214005..215276 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
LHK10_RS01025 (LHK10_01025)	-	215752..215859 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LHK10_RS01030 (LHK10_01030)	-	216235..216342 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LHK10_RS01035 (LHK10_01035)	-	216718..216825 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LHK10_RS01040 (LHK10_01040)	-	217201..217308 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=536553 LHK10_RS01010 WP_001196486.1 211991..212974(+) (amiE) [Escherichia coli strain P24_WM1_05.20]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=536553 LHK10_RS01010 WP_001196486.1 211991..212974(+) (amiE) [Escherichia coli strain P24_WM1_05.20]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404