Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LH706_RS14610 Genome accession   NZ_CP085043
Coordinates   3112378..3112845 (-) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain RS638     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3107378..3117845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LH706_RS14595 (LH706_14605) - 3108897..3111128 (-) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -
  LH706_RS14600 (LH706_14610) - 3111374..3111919 (-) 546 WP_011000625.1 chemotaxis protein CheW -
  LH706_RS14605 (LH706_14615) pilH 3111978..3112346 (-) 369 WP_003269243.1 response regulator Machinery gene
  LH706_RS14610 (LH706_14620) pilG 3112378..3112845 (-) 468 WP_016723446.1 response regulator Regulator
  LH706_RS14615 (LH706_14625) - 3113136..3113318 (-) 183 WP_003261842.1 rubredoxin -
  LH706_RS14620 (LH706_14630) hemL 3113530..3114831 (+) 1302 WP_011000623.1 glutamate-1-semialdehyde 2,1-aminomutase -
  LH706_RS14625 (LH706_14635) dapA 3114934..3115848 (-) 915 WP_071507572.1 4-hydroxy-tetrahydrodipicolinate synthase -
  LH706_RS14630 (LH706_14640) - 3116229..3116855 (+) 627 WP_016723449.1 LemA family protein -
  LH706_RS14635 (LH706_14645) - 3116868..3117722 (+) 855 WP_071507573.1 YgcG family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=536533 LH706_RS14610 WP_016723446.1 3112378..3112845(-) (pilG) [Ralstonia pseudosolanacearum strain RS638]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=536533 LH706_RS14610 WP_016723446.1 3112378..3112845(-) (pilG) [Ralstonia pseudosolanacearum strain RS638]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGTGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419