Detailed information NTG0535815

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6K03_RS09540
• Genome accession: NZ_CP069587
• Coordinates: 1972398..1973525 (-)
• Length: 375 a.a.
• NCBI ID: WP_043614018.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain FDAARGOS_1273
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1967398..1978525

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K03_RS09520 (I6K03_09520)	-	1967912..1969696 (+)	1785	WP_081526058.1	PglL family O-oligosaccharyltransferase	-
I6K03_RS09525 (I6K03_09525)	rpoH	1969787..1970650 (-)	864	WP_011137752.1	RNA polymerase sigma factor RpoH	-
I6K03_RS09530 (I6K03_09530)	ftsX	1970779..1971687 (-)	909	WP_011137751.1	permease-like cell division protein FtsX	-
I6K03_RS09535 (I6K03_09535)	ftsE	1971684..1972337 (-)	654	WP_011137750.1	cell division ATP-binding protein FtsE	-
I6K03_RS09540 (I6K03_09540)	pilA	1972398..1973525 (-)	1128	WP_043614018.1	signal recognition particle-docking protein FtsY	Machinery gene
I6K03_RS09545 (I6K03_09545)	rsmD	1973762..1974316 (+)	555	WP_043614015.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6K03_RS09550 (I6K03_09550)	-	1974426..1974677 (+)	252	WP_011137747.1	YfhL family 4Fe-4S dicluster ferredoxin	-
I6K03_RS09570 (I6K03_09570)	tuf	1975167..1976357 (+)	1191	WP_011137735.1	elongation factor Tu	-
I6K03_RS09580 (I6K03_09580)	secE	1976508..1976864 (+)	357	WP_081528141.1	preprotein translocase subunit SecE	-
I6K03_RS09585 (I6K03_09585)	nusG	1976864..1977397 (+)	534	WP_011137745.1	transcription termination/antitermination protein NusG	-
I6K03_RS09590 (I6K03_09590)	rplK	1977498..1977929 (+)	432	WP_011137744.1	50S ribosomal protein L11	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 40007.17 Da
• Isoelectric Point: 5.1869

>NTDB_id=535815 I6K03_RS09540 WP_043614018.1 1972398..1973525(-) (pilA) [Chromobacterium violaceum strain FDAARGOS_1273]
MFSFFKKKTKPAETPQIETPAPLAPEQAPAAPETIAPVPEPQREPVAAPIAETAPASAEAAVAAIPDEPVPLKKMSWTER
LKAGLAKTRDKLGKQLAGLFGGGKIDEDLYEELETVLLTADMGMDATVHLLQDVRERVSLKGLKDSSELKGALKDSLQDL
IGPLEVPLNVEGKKPFVIMMTGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLIAWGERNNVTVIAQQGGD
SAAVCYDAIQAAIARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVVLVLDANIGQNTVNQVKAFDDALG
LTGLILTKLDGTAKGGVIAAIAKQRPIPLRFVGVGESIDDLRPFDSRDYIDALFE

Nucleotide

• Length: 1128 bp

>NTDB_id=535815 I6K03_RS09540 WP_043614018.1 1972398..1973525(-) (pilA) [Chromobacterium violaceum strain FDAARGOS_1273]
ATGTTTAGCTTCTTCAAGAAAAAGACCAAGCCGGCCGAAACGCCGCAGATCGAAACGCCGGCGCCGCTCGCGCCGGAACA
GGCGCCCGCCGCGCCGGAGACCATCGCCCCCGTCCCGGAGCCGCAGCGCGAGCCCGTCGCCGCCCCCATCGCGGAAACAG
CCCCCGCCTCTGCTGAGGCCGCCGTTGCGGCCATCCCGGACGAGCCTGTGCCCCTGAAGAAAATGAGCTGGACCGAGCGG
CTGAAGGCAGGCCTGGCCAAAACCCGCGACAAGCTGGGCAAGCAGCTGGCCGGCCTGTTCGGCGGCGGCAAGATCGACGA
AGACCTGTACGAGGAACTGGAGACGGTGCTGCTGACCGCCGACATGGGCATGGACGCCACCGTGCACCTGCTGCAGGACG
TGCGCGAGCGGGTATCGCTGAAGGGGCTGAAAGATTCGTCCGAATTGAAGGGTGCGCTGAAGGATTCGCTTCAGGATCTG
ATCGGCCCGCTGGAAGTGCCGCTGAACGTGGAAGGCAAGAAGCCGTTCGTGATCATGATGACCGGCGTCAACGGCGCCGG
CAAGACCACCTCCATCGGCAAGCTGGCCAAGTATTACCAGAGCCAGGGCAAAAGCGTGCTGCTGGCCGCCGGCGACACCT
TCCGCGCCGCCGCGCGCGAGCAGCTGATCGCCTGGGGCGAGCGCAACAACGTCACCGTGATCGCGCAGCAAGGCGGCGAC
TCCGCCGCCGTCTGCTATGACGCGATCCAGGCCGCCATCGCCCGCGGCATCGACATCGTGCTGGCCGACACCGCGGGCCG
CCTGCCGACCCAGCTGCACCTGATGGAAGAGATCAAGAAGGTGAAGCGCGTGATCCAGAAGGCGCTGCCGGACGCGCCGC
ACGAGGTGGTACTGGTGCTGGACGCCAATATCGGCCAGAACACCGTCAATCAGGTGAAGGCCTTCGACGACGCGCTGGGC
CTGACCGGCCTGATCCTGACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGATCGCCGCCATCGCCAAGCAGCGGCCGAT
TCCGCTACGCTTCGTCGGCGTCGGCGAAAGCATCGACGACCTGCGGCCGTTCGACAGCCGCGACTACATCGACGCGCTGT
TCGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (92-157)

• SRP54-type protein, GTPase domain (SRP54) (175-374)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.158	100	0.704