Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   I6J46_RS06465 Genome accession   NZ_CP069586
Coordinates   1362879..1365107 (-) Length   742 a.a.
NCBI ID   WP_204085791.1    Uniprot ID   -
Organism   Acinetobacter pittii strain FDAARGOS_1216     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1357879..1370107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J46_RS06445 (I6J46_06445) cbpA 1358079..1359035 (-) 957 WP_017402580.1 DnaJ C-terminal domain-containing protein -
  I6J46_RS06450 (I6J46_06450) - 1359170..1359781 (-) 612 WP_002115157.1 LysE family translocator -
  I6J46_RS06455 (I6J46_06455) hslO 1359919..1360794 (-) 876 WP_002114728.1 Hsp33 family molecular chaperone HslO -
  I6J46_RS06460 (I6J46_06460) kefB 1360958..1362802 (-) 1845 WP_204085790.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  I6J46_RS06465 (I6J46_06465) priA 1362879..1365107 (-) 2229 WP_204085791.1 primosomal protein N' Machinery gene
  I6J46_RS06470 (I6J46_06470) gspF 1365256..1366461 (+) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  I6J46_RS06475 (I6J46_06475) gspG 1366485..1367000 (+) 516 WP_017385392.1 type II secretion system major pseudopilin GspG -
  I6J46_RS06480 (I6J46_06480) - 1367268..1367612 (+) 345 WP_005804170.1 hypothetical protein -
  I6J46_RS06485 (I6J46_06485) csaA 1367758..1368096 (+) 339 WP_204085792.1 tRNA-binding protein -
  I6J46_RS06490 (I6J46_06490) lnt 1368098..1369657 (-) 1560 WP_069141709.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84020.83 Da        Isoelectric Point: 8.4599

>NTDB_id=535784 I6J46_RS06465 WP_204085791.1 1362879..1365107(-) (priA) [Acinetobacter pittii strain FDAARGOS_1216]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVELAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTALQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKHTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTI
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQYQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=535784 I6J46_RS06465 WP_204085791.1 1362879..1365107(-) (priA) [Acinetobacter pittii strain FDAARGOS_1216]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCGCAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCTCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCGCACGACTTTAGCCCATCGCCTGTTGAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCATTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCTGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCGCGTTTTAACTGTGATATTGCTCTATTACACTCTGGCTTAAATGACTCCA
AACGTTTGCAGGCATGGCAACAGGCACAGACCGGAAAAGCGTCTATTATTCTAGGAACACGCTCTGCCATCTATACGCCA
CTGCCACGTTTGGGCCTTATCATTTTAGATGAAGAACATGATCTGTCTTATAAGCAACAAGAAGGCTTCCGTTACCATGC
GCGTGATGTCGCACTGTACCGCGGTCACTTGCAAAGCTGCCCTGTTATTTTAGGTTCAGCAACACCAAGTATTGATAGTT
ATTATTTGGTCGAAACTGGCAAATTAACTGCACTGCAACTCAACAAACGTGCTGGACATGCACTTTTGCCTAAAATGCAT
TTGATAGATCTTAAAATTGTCAAAAAGCAGCATGGAATTAGCCAGCCCCTTATTGAACAAATCAAACATACATTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTTTGTGAAAGCTGTGGATGGCAAGCAA
ATTGCCCGCATTGCGACGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACATTGCCATCACTGCGGAACCATT
CATCGCTTACCCGATCATTGCCCTGAATGTCAGCAAAAAAGCTTAAAAACTTTAGGTGCAGGAACCGCTAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGATCATGATGTCATTCGGGTCGATCGTGACAGTACCAGTCGTGTCGGAAGCTGGCAAA
AAATCTATGACCGTATTCATCAAAACAAACCAACAATTTTGCTTGGCACTCAAATGCTGGCAAAAGGTCATCATTTCCCA
CACGTGACTTTGGTTGCCATTTTAGATATTGATGCGGGGTTACTTAGTGTCGACATTCGCGCGCCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCTGGACGTGCAGGCCGTGGTGAACATAAAGGCCATGTTTATTTACAAACCCTAAGACCAGATC
ACCCTTTACTAACTACACTCATCGAAAAAGATTATCGGGCGGTTGCTAAACAGACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAATCTAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGAAATTGTTGATATTTGGGGTCCGATTCCAGCACCGATGGAACGTAAAGCTG
GGCGCTACCGCGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGGCAATGGTGGTCACAA
TTGGTTCATGCACCACGGCAGTATCAACTTCGGCTATCAATCGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.844

100

0.978