Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LB315_RS02440 Genome accession   NZ_CP084892
Coordinates   509255..510058 (+) Length   267 a.a.
NCBI ID   WP_229374318.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CC1956/ST4614-MSSA     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 504255..515058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LB315_RS02420 (LB315_02425) - 505801..507138 (+) 1338 WP_229374316.1 aminotransferase class V-fold PLP-dependent enzyme -
  LB315_RS02425 (LB315_02430) tmk 507140..507757 (+) 618 WP_001272126.1 dTMP kinase -
  LB315_RS02430 (LB315_02435) - 507785..508114 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  LB315_RS02435 (LB315_02440) - 508328..509254 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  LB315_RS02440 (LB315_02445) yaaT 509255..510058 (+) 804 WP_229374318.1 stage 0 sporulation family protein Regulator
  LB315_RS02445 (LB315_02450) yabA 510075..510422 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  LB315_RS02450 (LB315_02455) - 510696..511421 (+) 726 WP_229374320.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  LB315_RS02455 (LB315_02460) - 511414..511662 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  LB315_RS02460 (LB315_02465) rsmI 511664..512503 (+) 840 WP_000279930.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LB315_RS02465 (LB315_02470) metG 512788..514761 (+) 1974 WP_001051123.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30174.85 Da        Isoelectric Point: 4.6236

>NTDB_id=535693 LB315_RS02440 WP_229374318.1 509255..510058(+) (yaaT) [Staphylococcus aureus strain CC1956/ST4614-MSSA]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENAYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=535693 LB315_RS02440 WP_229374318.1 509255..510058(+) (yaaT) [Staphylococcus aureus strain CC1956/ST4614-MSSA]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGCTCTACATTTTTAGGAGATTTTGAACCAGTATCAATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGCCTACTATGAGG
AAGTACGTGCGCAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.357

98.502

0.614