Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LD199_RS00350 Genome accession   NZ_CP084878
Coordinates   74123..74923 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain GS426     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 69123..79923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LD199_RS00335 (LD199_00335) walK 69792..71618 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  LD199_RS00340 (LD199_00340) yycH 71611..72945 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  LD199_RS00345 (LD199_00345) - 72946..73734 (+) 789 WP_001104165.1 two-component system regulatory protein YycI -
  LD199_RS00350 (LD199_00350) vicX 74123..74923 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  LD199_RS00355 (LD199_00355) adsA 75150..77468 (+) 2319 WP_000645787.1 LPXTG-anchored adenosine synthase AdsA -
  LD199_RS00360 (LD199_00360) rlmH 77836..78315 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LD199_RS00365 (LD199_00365) - 78520..78654 (-) 135 WP_001790628.1 hypothetical protein -
  LD199_RS00370 (LD199_00370) - 78618..78710 (+) 93 WP_001790000.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=535602 LD199_RS00350 WP_000088649.1 74123..74923(+) (vicX) [Staphylococcus aureus strain GS426]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=535602 LD199_RS00350 WP_000088649.1 74123..74923(+) (vicX) [Staphylococcus aureus strain GS426]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474