Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LG939_RS17360 Genome accession   NZ_CP084738
Coordinates   3713448..3713915 (-) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain RS639     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3708448..3718915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG939_RS17345 (LG939_17350) - 3709969..3712198 (-) 2230 Protein_3400 methyl-accepting chemotaxis protein -
  LG939_RS17350 (LG939_17355) - 3712444..3712989 (-) 546 WP_011000625.1 chemotaxis protein CheW -
  LG939_RS17355 (LG939_17360) pilH 3713048..3713416 (-) 369 WP_003269243.1 response regulator Machinery gene
  LG939_RS17360 (LG939_17365) pilG 3713448..3713915 (-) 468 WP_016723446.1 response regulator Regulator
  LG939_RS17365 (LG939_17370) - 3714206..3714388 (-) 183 WP_003261842.1 rubredoxin -
  LG939_RS17370 (LG939_17375) hemL 3714600..3715901 (+) 1302 WP_020831381.1 glutamate-1-semialdehyde 2,1-aminomutase -
  LG939_RS17375 (LG939_17380) dapA 3716004..3716918 (-) 915 WP_020831380.1 4-hydroxy-tetrahydrodipicolinate synthase -
  LG939_RS17380 (LG939_17385) - 3717299..3717925 (+) 627 WP_016723449.1 LemA family protein -
  LG939_RS17385 (LG939_17390) - 3717938..3718786 (+) 849 WP_020831378.1 YgcG family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=535595 LG939_RS17360 WP_016723446.1 3713448..3713915(-) (pilG) [Ralstonia pseudosolanacearum strain RS639]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=535595 LG939_RS17360 WP_016723446.1 3713448..3713915(-) (pilG) [Ralstonia pseudosolanacearum strain RS639]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGTGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419