Detailed information NTG0535542

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: I6J38_RS06625
• Genome accession: NZ_CP069558
• Coordinates: 1342928..1344346 (-)
• Length: 472 a.a.
• NCBI ID: WP_148290517.1
• Uniprot ID: -
• Organism: Streptococcus constellatus strain FDAARGOS_1208
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1337928..1349346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J38_RS06605 (I6J38_06605)	-	1338683..1339519 (+)	837	WP_006268080.1	putative RNA methyltransferase	-
I6J38_RS06610 (I6J38_06610)	-	1339577..1340257 (-)	681	WP_006268016.1	rhomboid family intramembrane serine protease	-
I6J38_RS06615 (I6J38_06615)	-	1340250..1340777 (-)	528	WP_006268553.1	5-formyltetrahydrofolate cyclo-ligase	-
I6J38_RS06620 (I6J38_06620)	gltX	1341233..1342690 (-)	1458	WP_006268479.1	glutamate--tRNA ligase	-
I6J38_RS06625 (I6J38_06625)	radA	1342928..1344346 (-)	1419	WP_148290517.1	DNA repair protein RadA	Machinery gene
I6J38_RS06630 (I6J38_06630)	-	1344306..1344749 (-)	444	WP_006268335.1	dUTP diphosphatase	-
I6J38_RS06635 (I6J38_06635)	-	1344843..1345877 (-)	1035	WP_006268236.1	S66 family peptidase	-
I6J38_RS10170	-	1346096..1346275 (-)	180	Protein_1324	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	-
I6J38_RS06640 (I6J38_06640)	-	1346360..1347376 (+)	1017	WP_006268051.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	-
I6J38_RS06645 (I6J38_06645)	galU	1347402..1348301 (+)	900	WP_006268010.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 51656.52 Da
• Isoelectric Point: 6.2789

>NTDB_id=535542 I6J38_RS06625 WP_148290517.1 1342928..1344346(-) (radA) [Streptococcus constellatus strain FDAARGOS_1208]
MVCGQVVLEALGIKKEESIIAKKKSTFVCQNCEYHSPKYLGRCPNCGTWSSFVEEVEVAEVKNARVSLTGEKTRPMKLAE
VTSIDVKRTKTDMDEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSHKGTVLYVSGEESAEQIKLRAERLGDID
SEFYLYAETNMQHIRAEIEKIKPDFLIIDSIQTIVSPEISSMQGSVSQVREVTAELMQLAKTNNIATFIVGHMTKEGTLA
GPRTLEHMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTR
PILAEVQALVTPTMFGNAKRTTAGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVRLDEPAIDLAVAVAIASSYKEK
PTNPQECYIGEIGLTGEIRRVNRIEQRITEAVKLGFTKIYVPKNSLNGLNIPDKTEVIGVTTIGEVLKKVFG

Nucleotide

• Length: 1419 bp

>NTDB_id=535542 I6J38_RS06625 WP_148290517.1 1342928..1344346(-) (radA) [Streptococcus constellatus strain FDAARGOS_1208]
ATGGTGTGCGGACAGGTGGTTTTGGAAGCACTGGGCATTAAGAAAGAGGAATCTATCATAGCCAAGAAAAAATCGACATT
TGTTTGTCAAAATTGTGAATACCATTCGCCCAAGTATCTGGGGCGTTGTCCGAATTGTGGTACTTGGTCGTCTTTTGTAG
AAGAAGTAGAAGTGGCAGAAGTCAAAAATGCGCGTGTTTCTCTGACCGGAGAAAAAACACGACCGATGAAATTGGCAGAA
GTAACTTCTATTGATGTGAAGCGCACCAAGACGGATATGGACGAATTTAACCGCGTTTTAGGCGGTGGTGTGGTGCCGGG
AAGTTTAGTTCTAATCGGAGGAGATCCCGGTATTGGGAAATCGACACTTTTATTGCAGGTTTCAACCCAACTCTCTCACA
AGGGAACGGTTCTTTATGTCAGCGGCGAGGAGTCTGCTGAGCAGATTAAACTGCGAGCTGAGCGATTAGGAGATATTGAT
AGTGAATTTTATCTCTATGCCGAGACCAATATGCAGCATATTCGTGCCGAGATTGAAAAAATCAAACCGGATTTTTTGAT
TATCGATTCCATTCAGACGATTGTGTCGCCAGAAATTTCCAGCATGCAGGGCTCGGTTTCGCAAGTGCGGGAGGTGACAG
CAGAACTCATGCAGTTGGCGAAAACCAACAATATTGCCACCTTTATCGTGGGTCATATGACCAAGGAAGGAACGCTGGCT
GGTCCACGAACGCTAGAGCATATGGTGGATACAGTGCTGTATTTTGAAGGAGAACGTCAGCATACTTTCCGTATTTTGCG
GGCAGTTAAAAATCGTTTCGGTTCGACCAACGAAATCGGCATTTTTGAGATGCAGTCAGGTGGTCTGGTTGAAGTGCTCA
ATCCTAGTCAGGTTTTCTTAGAGGAGCGTTTAGATGGTGCGACAGGCTCTTCTATCGTGGTGACGATGGAGGGGACACGA
CCGATTTTGGCGGAAGTGCAGGCTCTGGTGACACCGACCATGTTTGGCAATGCCAAGCGGACAACGGCAGGTCTGGACTT
CAATCGTGCCAGCCTGATTATGGCTGTTTTGGAGAAACGAGCTGGTTTGCTTCTGCAAAATCAAGATGCTTATCTCAAAT
CAGCTGGTGGTGTGCGCTTAGATGAGCCTGCTATTGATTTAGCGGTTGCGGTAGCCATTGCTTCCAGTTATAAGGAAAAG
CCAACCAACCCTCAAGAATGTTATATTGGCGAAATTGGTTTGACAGGCGAAATCCGCCGTGTCAATCGCATTGAGCAGCG
CATCACCGAAGCTGTTAAGTTAGGCTTCACAAAAATTTATGTTCCTAAAAACTCTTTGAACGGATTGAATATTCCCGACA
AGACTGAAGTTATTGGTGTGACAACGATTGGTGAAGTATTGAAAAAGGTGTTTGGGTAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (27-54)

• AAA domain (AAA_25) (84-237)

• Subunit ChlI of Mg-chelatase (ChlI) (381-444)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae Rx1	90.508	95.975	0.869
radA	Streptococcus pneumoniae D39	90.508	95.975	0.869
radA	Streptococcus pneumoniae R6	90.508	95.975	0.869
radA	Streptococcus pneumoniae TIGR4	90.508	95.975	0.869
radA	Streptococcus mitis SK321	90.508	95.975	0.869
radA	Streptococcus mitis NCTC 12261	90.287	95.975	0.867
radA	Bacillus subtilis subsp. subtilis str. 168	61.269	96.822	0.593