Detailed information NTG0535300

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: I6J61_RS02025
• Genome accession: NZ_CP069520
• Coordinates: 440463..441851 (-)
• Length: 462 a.a.
• NCBI ID: WP_002573498.1
• Uniprot ID: A0A412Z111
• Organism: Enterocloster bolteae strain FDAARGOS_1231
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 435463..446851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J61_RS02025 (I6J61_02025)	radA	440463..441851 (-)	1389	WP_002573498.1	DNA repair protein RadA	Machinery gene
I6J61_RS02030 (I6J61_02030)	-	441940..442356 (-)	417	WP_002567200.1	hypothetical protein	-
I6J61_RS02035 (I6J61_02035)	-	442475..445084 (-)	2610	WP_002567199.1	ATP-dependent Clp protease ATP-binding subunit	-
I6J61_RS02040 (I6J61_02040)	-	445138..446172 (-)	1035	WP_002567198.1	ATP--guanido phosphotransferase	-
I6J61_RS02045 (I6J61_02045)	-	446165..446782 (-)	618	WP_002567197.1	UvrB/UvrC motif-containing protein	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 49969.49 Da
• Isoelectric Point: 5.4314

>NTDB_id=535300 I6J61_RS02025 WP_002573498.1 440463..441851(-) (radA) [Enterocloster bolteae strain FDAARGOS_1231]
MAKARTTAFFCKECGYESSKWMGQCPACKAWNSMVEEPVSKPSGSQGGLGRLASGSQKSPVPAARPSLLSEIDIEEQDRI
STGFGELDRVLGDGIVAGSLVLVGGDPGIGKSTLLLQVCRNLAGAGQRVLYISGEESLKQIKMRANRIGPVTGELKFLCE
TSLEHIERAIDTENPQIAVIDSIQTMYREEISSAPGSVSQVRESTGILMQIAKSRGIAIFVVGHVTKEGVVAGPRVLEHM
VDTVLYFEGDRNASYRILRSVKNRFGSTNEIGVFEMQEQGLAEVENPSEYMLDGRPEEASGAVVSCSFEGTRPILLEVQA
LVTETNFGMPRRTAAGTDYNRVNLLMAVLEKRCRYEMSRLDAYVNIAGGMKMNEPALDLAIIMALMSSYKDRPVDPKMLI
FGEVGLSGEVRAVSQASQRVNEAAKLGFTACVLPSVCADKMKPVEGIRLIGVSNVREAIGIM

Nucleotide

• Length: 1389 bp

>NTDB_id=535300 I6J61_RS02025 WP_002573498.1 440463..441851(-) (radA) [Enterocloster bolteae strain FDAARGOS_1231]
ATGGCAAAAGCGAGAACCACCGCATTTTTCTGTAAGGAATGCGGATATGAATCATCCAAATGGATGGGGCAGTGTCCTGC
CTGCAAGGCCTGGAATTCCATGGTGGAGGAACCGGTATCAAAACCGTCAGGCAGCCAGGGCGGGTTAGGGCGCCTGGCTT
CGGGGAGCCAGAAATCCCCGGTTCCGGCAGCCAGACCATCTCTTCTGTCAGAGATTGACATAGAGGAGCAGGACCGTATA
TCCACTGGTTTTGGGGAACTGGACCGGGTGCTGGGAGACGGAATCGTGGCCGGCTCCCTGGTGCTGGTGGGGGGAGACCC
GGGTATCGGAAAATCCACCCTTTTGCTTCAGGTATGCCGGAATCTGGCGGGCGCAGGCCAGCGGGTTCTGTACATATCAG
GGGAGGAATCCTTAAAACAGATTAAGATGAGGGCAAACCGCATCGGTCCTGTGACCGGAGAGCTGAAATTCCTGTGTGAG
ACAAGCCTGGAGCATATTGAGAGGGCCATTGACACTGAGAATCCCCAGATTGCAGTCATTGACTCCATACAGACCATGTA
CAGGGAGGAGATATCCTCTGCTCCCGGAAGCGTCAGCCAGGTAAGGGAGTCCACAGGAATCCTGATGCAGATAGCAAAGA
GCCGGGGAATCGCCATTTTTGTGGTGGGGCATGTGACAAAGGAAGGCGTGGTGGCAGGCCCCAGGGTACTGGAACATATG
GTGGATACGGTACTCTATTTTGAGGGAGACAGGAATGCGTCCTACCGCATTCTGCGCAGTGTGAAAAACCGGTTTGGATC
TACCAATGAGATAGGTGTATTTGAGATGCAGGAACAGGGGCTGGCAGAGGTGGAGAATCCCTCTGAATACATGCTGGACG
GCCGGCCGGAGGAAGCCTCGGGCGCAGTGGTATCCTGTTCCTTTGAGGGCACCAGGCCCATCCTTTTAGAGGTACAGGCC
CTGGTGACGGAAACGAATTTCGGTATGCCCAGGCGGACGGCGGCCGGTACGGATTACAACCGTGTGAACCTGCTGATGGC
AGTGCTGGAGAAGCGCTGCCGCTATGAGATGTCGCGGCTGGATGCCTATGTGAATATAGCGGGAGGCATGAAGATGAACG
AGCCAGCCCTGGATCTGGCCATTATCATGGCCCTTATGTCCAGCTACAAGGACCGGCCCGTGGATCCGAAAATGCTCATA
TTCGGGGAGGTGGGCTTGTCAGGAGAGGTCAGGGCCGTATCCCAGGCCAGCCAGCGTGTGAATGAGGCTGCCAAGCTGGG
CTTTACCGCCTGTGTGCTGCCGAGCGTATGCGCGGATAAGATGAAGCCTGTGGAGGGCATACGTTTGATTGGGGTGTCCA
ATGTGCGGGAGGCTATTGGAATCATGTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (351-435)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-36)

• AAA domain (AAA_25) (86-229)

3D structure

• AlphaFold DB: A0A412Z111

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	56.304	99.567	0.561
radA	Streptococcus mitis NCTC 12261	51.634	99.351	0.513
radA	Streptococcus mitis SK321	51.634	99.351	0.513
radA	Streptococcus pneumoniae Rx1	51.416	99.351	0.511
radA	Streptococcus pneumoniae D39	51.416	99.351	0.511
radA	Streptococcus pneumoniae R6	51.416	99.351	0.511
radA	Streptococcus pneumoniae TIGR4	51.416	99.351	0.511