Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LEL86_RS25895 Genome accession   NZ_CP084357
Coordinates   6029469..6030266 (+) Length   265 a.a.
NCBI ID   WP_010072358.1    Uniprot ID   A0ABZ1ZGP1
Organism   Streptomyces sp. WA6-1-16     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6024469..6035266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LEL86_RS25880 (LEL86_25880) - 6024710..6025246 (+) 537 WP_225682498.1 TerD family protein -
  LEL86_RS25885 (LEL86_25885) - 6025369..6028266 (-) 2898 WP_225682499.1 vitamin B12-dependent ribonucleotide reductase -
  LEL86_RS25890 (LEL86_25890) nrdR 6028432..6028944 (-) 513 WP_006128060.1 transcriptional regulator NrdR -
  LEL86_RS25895 (LEL86_25895) dinR/lexA 6029469..6030266 (+) 798 WP_010072358.1 transcriptional repressor LexA Regulator
  LEL86_RS25900 (LEL86_25900) - 6030408..6032378 (-) 1971 WP_093444145.1 ATP-dependent DNA helicase -
  LEL86_RS25905 (LEL86_25905) - 6032417..6034384 (-) 1968 WP_225682500.1 IucA/IucC family protein -
  LEL86_RS25910 (LEL86_25910) - 6034445..6035170 (-) 726 WP_225682501.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 28777.52 Da        Isoelectric Point: 7.4761

>NTDB_id=534975 LEL86_RS25895 WP_010072358.1 6029469..6030266(+) (dinR/lexA) [Streptomyces sp. WA6-1-16]
MTTTADSATITARDHRSQSRLEPVHAMNDSVTNTDGPEPARPGRSMPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGY
PPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILA
EESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREDGHVWLLPH
NAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 798 bp        

>NTDB_id=534975 LEL86_RS25895 WP_010072358.1 6029469..6030266(+) (dinR/lexA) [Streptomyces sp. WA6-1-16]
GTGACCACCACCGCAGACAGCGCCACCATCACCGCCCGGGACCACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCAT
GAATGACTCAGTCACGAACACGGACGGGCCCGAGCCCGCACGCCCCGGACGTTCCATGCCCGGCAGGCCTCCCGGCATCC
GGGCGGACAGCTCGGGGCTCACGGACCGACAGCGGCGGGTCATCGAGGTCATCCGCGACTCCGTGCAGCGGCGGGGATAC
CCGCCCTCCATGCGGGAGATCGGTCAGGCGGTGGGCCTCTCGAGCACCTCGTCCGTCGCCCACCAGCTGATGGCCCTGGA
GCGCAAGGGCTTCCTCCGCCGCGACCCGCACCGCCCCCGCGCGTACGAGGTGCGCGGATCGGACCAGCCCAGCACCCAGC
CGACCGACACGACGGGCAAGCCCGCCGCGTCCTATGTGCCGCTGGTGGGCCGGATCGCCGCCGGTGGTCCGATCCTCGCC
GAGGAGTCCGTCGAGGACGTCTTCCCGCTCCCCCGCCAGCTCGTCGGTGACGGTGAGCTCTTCGTCCTGAAGGTCGTCGG
TGACTCGATGATCGAGGCCGCGATCTGTGACGGCGACTGGGTCACCGTCCGCCGCCAGCCCGTCGCGGAGAACGGGGACA
TCGTCGCCGCCATGCTCGACGGCGAGGCGACGGTCAAGCGCTTCCGCCGGGAGGACGGTCACGTATGGCTGCTGCCTCAC
AACGCCGCGTACCAGCCGATCCCCGGCGACGAGGCGACCATCCTGGGCAAGGTGGTGGCGGTGCTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(147-259)

LexA DNA binding domain (LexA_DNA_bind)

(58-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80

0.37