Detailed information NTG0534734

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6K04_RS13190
• Genome accession: NZ_CP069442
• Coordinates: 2819261..2820388 (+)
• Length: 375 a.a.
• NCBI ID: WP_043614018.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain FDAARGOS_1274
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2814261..2825388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K04_RS13140 (I6K04_13140)	rplK	2814857..2815288 (-)	432	WP_011137744.1	50S ribosomal protein L11	-
I6K04_RS13145 (I6K04_13145)	nusG	2815389..2815922 (-)	534	WP_011137745.1	transcription termination/antitermination protein NusG	-
I6K04_RS13150 (I6K04_13150)	secE	2815922..2816278 (-)	357	WP_081528141.1	preprotein translocase subunit SecE	-
I6K04_RS13160 (I6K04_13160)	tuf	2816429..2817619 (-)	1191	WP_011137735.1	elongation factor Tu	-
I6K04_RS13180 (I6K04_13180)	-	2818109..2818360 (-)	252	WP_011137747.1	YfhL family 4Fe-4S dicluster ferredoxin	-
I6K04_RS13185 (I6K04_13185)	rsmD	2818470..2819024 (-)	555	WP_043614015.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6K04_RS13190 (I6K04_13190)	pilA	2819261..2820388 (+)	1128	WP_043614018.1	signal recognition particle-docking protein FtsY	Machinery gene
I6K04_RS13195 (I6K04_13195)	ftsE	2820449..2821102 (+)	654	WP_011137750.1	cell division ATP-binding protein FtsE	-
I6K04_RS13200 (I6K04_13200)	ftsX	2821099..2822007 (+)	909	WP_011137751.1	permease-like cell division protein FtsX	-
I6K04_RS13205 (I6K04_13205)	rpoH	2822136..2822999 (+)	864	WP_011137752.1	RNA polymerase sigma factor RpoH	-
I6K04_RS13210 (I6K04_13210)	-	2823090..2824874 (-)	1785	WP_081526058.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 40007.17 Da
• Isoelectric Point: 5.1869

>NTDB_id=534734 I6K04_RS13190 WP_043614018.1 2819261..2820388(+) (pilA) [Chromobacterium violaceum strain FDAARGOS_1274]
MFSFFKKKTKPAETPQIETPAPLAPEQAPAAPETIAPVPEPQREPVAAPIAETAPASAEAAVAAIPDEPVPLKKMSWTER
LKAGLAKTRDKLGKQLAGLFGGGKIDEDLYEELETVLLTADMGMDATVHLLQDVRERVSLKGLKDSSELKGALKDSLQDL
IGPLEVPLNVEGKKPFVIMMTGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLIAWGERNNVTVIAQQGGD
SAAVCYDAIQAAIARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVVLVLDANIGQNTVNQVKAFDDALG
LTGLILTKLDGTAKGGVIAAIAKQRPIPLRFVGVGESIDDLRPFDSRDYIDALFE

Nucleotide

• Length: 1128 bp

>NTDB_id=534734 I6K04_RS13190 WP_043614018.1 2819261..2820388(+) (pilA) [Chromobacterium violaceum strain FDAARGOS_1274]
ATGTTTAGCTTCTTCAAGAAAAAGACCAAGCCGGCCGAAACGCCGCAGATCGAAACGCCGGCGCCGCTCGCGCCGGAACA
GGCGCCCGCCGCGCCGGAGACCATCGCCCCCGTCCCGGAGCCGCAGCGCGAGCCCGTCGCCGCCCCCATCGCGGAAACAG
CCCCCGCCTCTGCTGAGGCCGCCGTTGCGGCCATCCCGGACGAGCCTGTGCCCCTGAAGAAAATGAGCTGGACCGAGCGG
CTGAAGGCAGGCCTGGCCAAAACCCGCGACAAGCTGGGCAAGCAGCTGGCCGGCCTGTTCGGCGGCGGCAAGATCGACGA
AGACCTGTACGAGGAACTGGAGACGGTGCTGCTGACCGCCGACATGGGCATGGACGCCACCGTGCACCTGCTGCAGGACG
TGCGCGAGCGGGTATCGCTGAAGGGGCTGAAAGATTCGTCCGAATTGAAGGGTGCGCTGAAGGATTCGCTTCAGGATCTG
ATCGGCCCGCTGGAAGTGCCGCTGAACGTGGAAGGCAAGAAGCCGTTCGTGATCATGATGACCGGCGTCAACGGCGCCGG
CAAGACCACCTCCATCGGCAAGCTGGCCAAGTATTACCAGAGCCAGGGCAAAAGCGTGCTGCTGGCCGCCGGCGACACCT
TCCGCGCCGCCGCGCGCGAGCAGCTGATCGCCTGGGGCGAGCGCAACAACGTCACCGTGATCGCGCAGCAAGGCGGCGAC
TCCGCCGCCGTCTGCTATGACGCGATCCAGGCCGCCATCGCCCGCGGCATCGACATCGTGCTGGCCGACACCGCGGGCCG
CCTGCCGACCCAGCTGCACCTGATGGAAGAGATCAAGAAGGTGAAGCGCGTGATCCAGAAGGCGCTGCCGGACGCGCCGC
ACGAGGTGGTACTGGTGCTGGACGCCAATATCGGCCAGAACACCGTCAATCAGGTGAAGGCCTTCGACGACGCGCTGGGC
CTGACCGGCCTGATCCTGACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGATCGCCGCCATCGCCAAGCAGCGGCCGAT
TCCGCTACGCTTCGTCGGCGTCGGCGAAAGCATCGACGACCTGCGGCCGTTCGACAGCCGCGACTACATCGACGCGCTGT
TCGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (92-157)

• SRP54-type protein, GTPase domain (SRP54) (175-374)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.158	100	0.704