Detailed information NTG0534664

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LDB16_RS00865
• Genome accession: NZ_CP084209
• Coordinates: 179883..180866 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EC2648-R2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 174883..185866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDB16_RS00850 (LDB16_00850)	dppA	176026..177633 (+)	1608	WP_072647354.1	dipeptide ABC transporter substrate-binding protein DppA	-
LDB16_RS23250	-	177667..177777 (-)	111	Protein_167	hypothetical protein	-
LDB16_RS00855 (LDB16_00855)	dppB	177941..178960 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LDB16_RS00860 (LDB16_00860)	dppC	178970..179872 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LDB16_RS00865 (LDB16_00865)	amiE	179883..180866 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LDB16_RS00870 (LDB16_00870)	dppF	180863..181867 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LDB16_RS00875 (LDB16_00875)	yhjV	181897..183168 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LDB16_RS00880 (LDB16_00880)	ldrD	183644..183751 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LDB16_RS00885 (LDB16_00885)	bcsG	183838..185517 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
LDB16_RS00890 (LDB16_00890)	bcsF	185514..185705 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=534664 LDB16_RS00865 WP_001196486.1 179883..180866(+) (amiE) [Escherichia coli strain EC2648-R2]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=534664 LDB16_RS00865 WP_001196486.1 179883..180866(+) (amiE) [Escherichia coli strain EC2648-R2]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404