Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KBP30_RS27245 Genome accession   NZ_CP084203
Coordinates   6350812..6352545 (-) Length   577 a.a.
NCBI ID   WP_189294142.1    Uniprot ID   -
Organism   Streptomyces sp. Go40/10 strain Go 40/10     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6345812..6357545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KBP30_RS27230 (KBP30_27240) - 6346867..6348126 (-) 1260 WP_230920777.1 hypothetical protein -
  KBP30_RS27235 (KBP30_27245) - 6348192..6348701 (-) 510 WP_189294144.1 SigE family RNA polymerase sigma factor -
  KBP30_RS27240 (KBP30_27250) rcrQ 6348884..6350812 (-) 1929 WP_189294143.1 ABC transporter ATP-binding protein Regulator
  KBP30_RS27245 (KBP30_27255) rcrP 6350812..6352545 (-) 1734 WP_189294142.1 ABC transporter ATP-binding protein Regulator
  KBP30_RS27250 (KBP30_27260) - 6352646..6354085 (-) 1440 WP_189294141.1 FGGY family carbohydrate kinase -
  KBP30_RS27255 (KBP30_27265) - 6354149..6354454 (-) 306 WP_189294140.1 YtxH domain-containing protein -
  KBP30_RS27275 (KBP30_27285) - 6355518..6356792 (+) 1275 WP_230920778.1 M20 family metallopeptidase -
  KBP30_RS27280 (KBP30_27290) - 6356789..6357316 (+) 528 WP_230920779.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62535.73 Da        Isoelectric Point: 6.2736

>NTDB_id=534469 KBP30_RS27245 WP_189294142.1 6350812..6352545(-) (rcrP) [Streptomyces sp. Go40/10 strain Go 40/10]
MLIRLLRTYLRPYKKPIALLVVLQFLQTCATLYLPTLNADIIDNGVVKGDTGYILSFGALMIAISLVQVVCNIGAVYYGA
RTASALGRDVRGAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGIVLALGLDVPLSGV
LVAVVPVLGVSVTLIVRRLRPLFRSMQVRLDTVNRVLREQITGNRVIRAFVRDEYEQGRFGKANAELTDMQLATGRMLAL
MFPIVMTVVNLSSIAVVWFGAHRIDSGQMAIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLDTDSSVVP
PKAPVTELRAHGHLEIRGAGFRYPGAEEPVLKSIDLTARPGETTAVIGSTGSGKSTLLGLVPRLFDATEGEVLVDGTNVQ
EVDPRLLAKTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQAKDFVSRLEGGLDAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETAEATVVIVAQRVATIRDADRIIVLDEGRVVGTGRHAELMASN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=534469 KBP30_RS27245 WP_189294142.1 6350812..6352545(-) (rcrP) [Streptomyces sp. Go40/10 strain Go 40/10]
GTGCTCATACGACTTCTGCGGACCTATCTCAGGCCCTACAAGAAACCCATCGCCTTGCTGGTGGTGCTGCAGTTCCTGCA
GACCTGCGCCACCCTCTACCTGCCCACTCTCAACGCGGACATCATCGACAACGGTGTCGTGAAGGGTGACACGGGTTACA
TCCTGTCCTTCGGCGCCCTGATGATCGCCATCTCGCTGGTCCAGGTCGTGTGCAACATCGGTGCCGTGTACTACGGTGCC
CGGACCGCCTCCGCGCTCGGCCGGGACGTGCGCGGGGCCGTCTTCGACCGGGTCCAGTCCTTCTCCGCGCGTGAGGTGGG
TCACTTCGGGGCGCCCTCCCTCATCACCCGTACGACGAACGACGTGCAGCAGGTCCAGATGCTGGCCCTGATGACGTTCA
CCCTGATGGTGTCGGCGCCCATCATGTGCGTGGGCGGGATCGTGCTGGCGCTCGGCCTGGACGTGCCGCTGTCGGGGGTA
CTGGTCGCGGTCGTGCCGGTGCTCGGCGTCTCCGTGACGCTGATCGTGCGCCGGCTGCGTCCGCTGTTCCGGTCGATGCA
GGTCCGGCTGGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTGATCCGCGCCTTCGTCCGGGACG
AGTACGAGCAGGGCCGGTTCGGGAAGGCCAACGCCGAACTGACCGACATGCAGCTGGCCACCGGCCGGATGCTCGCCCTG
ATGTTCCCGATCGTGATGACGGTGGTGAACCTGTCGTCCATCGCGGTGGTGTGGTTCGGCGCCCACCGGATCGACAGCGG
TCAGATGGCGATCGGCGACCTCACCGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGCGCCGAGCGCATCCAGGAGGTCCTGGACACCGATTCCAGCGTGGTGCCG
CCGAAGGCTCCCGTCACCGAGCTGCGCGCGCACGGGCACCTGGAGATCCGGGGGGCGGGTTTCCGCTATCCGGGTGCCGA
GGAGCCGGTGCTGAAGTCCATCGACCTGACGGCGCGGCCGGGTGAGACGACCGCCGTGATCGGCTCCACCGGCAGCGGCA
AGTCGACGCTGCTCGGACTCGTCCCCCGGCTGTTCGACGCCACCGAGGGCGAGGTCCTCGTCGACGGAACGAACGTCCAG
GAGGTCGACCCGCGGCTGCTCGCGAAGACCGTCGGACTGGTGCCGCAGAAGCCGTACCTGTTCGCGGGCACCGTCGCCAC
GAACCTTCGCTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGACTTCG
TCAGCAGGCTGGAGGGCGGCCTGGACGCGCCGATCGCGCAGGGAGGCACCAATGTCTCCGGCGGTCAGCGGCAGCGGCTC
GCCATCGCCCGCACCCTGGTGCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCACTCGACTACGCCACCGA
CGCGGCCCTGCGCGCGGCGCTCGCCCGGGAGACCGCCGAGGCGACCGTCGTGATCGTCGCGCAGCGGGTGGCGACCATCC
GGGACGCGGACCGGATCATCGTGCTGGACGAGGGCCGGGTCGTCGGCACCGGCCGGCACGCCGAGCTGATGGCATCCAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.175

100

0.395