Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ICR95_RS09390 Genome accession   NZ_CP069397
Coordinates   1827714..1828664 (-) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia megaterium strain CDC 2008724129     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1822714..1833664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICR95_RS09360 (ICR95_09360) - 1822781..1823860 (+) 1080 WP_099331135.1 PrsW family intramembrane metalloprotease -
  ICR95_RS09365 (ICR95_09365) - 1824329..1824469 (-) 141 WP_014459290.1 hypothetical protein -
  ICR95_RS09370 (ICR95_09370) - 1824732..1825004 (-) 273 Protein_1878 manganese catalase family protein -
  ICR95_RS09375 (ICR95_09375) - 1825042..1825998 (-) 957 WP_028414464.1 siderophore ABC transporter substrate-binding protein -
  ICR95_RS09380 (ICR95_09380) - 1826022..1826780 (-) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  ICR95_RS09385 (ICR95_09385) - 1826774..1827721 (-) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  ICR95_RS09390 (ICR95_09390) ceuB 1827714..1828664 (-) 951 WP_028414467.1 ABC transporter permease Machinery gene
  ICR95_RS09395 (ICR95_09395) - 1829228..1830034 (-) 807 WP_013057892.1 cell wall hydrolase -
  ICR95_RS09400 (ICR95_09400) - 1830397..1830651 (+) 255 WP_013057893.1 hypothetical protein -
  ICR95_RS09405 (ICR95_09405) - 1830733..1830897 (-) 165 WP_013057894.1 hypothetical protein -
  ICR95_RS09410 (ICR95_09410) - 1831388..1831573 (-) 186 WP_014459286.1 hypothetical protein -
  ICR95_RS09415 (ICR95_09415) - 1832130..1832693 (-) 564 WP_098112347.1 NAD(P)H-dependent oxidoreductase -
  ICR95_RS09420 (ICR95_09420) lepB 1832929..1833489 (-) 561 WP_098112348.1 signal peptidase I -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=534437 ICR95_RS09390 WP_028414467.1 1827714..1828664(-) (ceuB) [Priestia megaterium strain CDC 2008724129]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=534437 ICR95_RS09390 WP_028414467.1 1827714..1828664(-) (ceuB) [Priestia megaterium strain CDC 2008724129]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGGTTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCCAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497